Acidithiobacillus ferridurans: AFERRID_14530
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Entry
AFERRID_14530 CDS
T05847
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afj
Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afj03032
]
AFERRID_14530
03400 DNA repair and recombination proteins [BR:
afj03400
]
AFERRID_14530
Enzymes [BR:
afj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
AFERRID_14530
DNA replication proteins [BR:
afj03032
]
Prokaryotic type
DNA Topoisomerases
AFERRID_14530
DNA repair and recombination proteins [BR:
afj03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
AFERRID_14530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim
Motif
Other DBs
NCBI-ProteinID:
BBF65235
UniProt:
A0A2Z6IMC7
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All DBs
Position
1400433..1401995
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AA seq
520 aa
AA seq
DB search
MAHQLVIVESPAKAKTIQKYLGDDFQVLASYGHVRDLQPKEGAVDTERDFAMRYTAIERN
ERHVDAIAKALRGADKLWLATDPDREGEAISWHLVELLRERHLLGDKPTQRVVFHEITKK
AVQEAIAHPREIAMDLVNAQQARRALDYLVGFNLSPLLWRKVRPGLSAGRVQSAALRLIC
ERENEIEAFVSREYWTIASRLQHAGSTFTARLTHWQNKKLEQFDIADGDQAQAIRSGMED
DLGHQALRVREVERKSRQRQPAAPFTTSTLQQEASRKLGFNASRTMRVAQQLYEGINIGN
ETVGLISYMRTDAVNLAEEAIASIRTFIDGYYGSEFVPETPRRYKTKTKNAQEAHEAIRP
TDIARTPESLQGVLERDLWRLYELVWKRSIACQMAPARLDLVAVDMDAGTHWTLRANGSM
VTFPGFMAVYQEGKDDGDEDENNRILPPLDVGDEPQVLGVDPEQHFTEPPLVTAMPPWSK
PWKPTASAGHPPTPASFRLCRTANTSPSSSADSIPPTSAG
NT seq
1563 nt
NT seq
+upstream
nt +downstream
nt
atggcacaccagctcgttatcgtagaatcaccggcaaaagccaagaccatccagaaatat
ctgggggatgattttcaggtgcttgcgtcctacggccacgtccgtgatctgcagcccaaa
gagggcgctgtggacacggagcgtgatttcgccatgcgctataccgccatcgagcgcaac
gagcgccatgtggatgccattgccaaggccctgcgcggagccgataaactttggctcgcc
accgatccggatcgcgaaggcgaggccatctcctggcacctggtggagctcttgcgcgaa
cgccacctgctcggtgacaagccgacgcaacgcgtggtctttcatgaaattaccaaaaaa
gccgtgcaggaggccattgcccatccccgcgaaatcgccatggatctggtcaacgcccag
caggcgcgccgtgccctcgattatctggtaggcttcaacctgtcaccgctgctctggcgc
aaggtgcgtccggggctctccgcgggacgggtacaaagcgccgccctgcgcctgatctgt
gagcgcgaaaacgagatcgaggccttcgtcagccgcgaatactggaccatcgccagccgc
ctgcaacacgcgggcagcacgttcaccgcccgcctgacccattggcagaataaaaagctc
gaacagttcgacatcgccgacggtgaccaggcccaggccattcgtagcggcatggaagac
gacctcggtcaccaggcactgcgggtccgggaagtggagcgcaaaagccggcaacgccag
ccggccgcgcccttcaccacctccaccctgcagcaggaagcgtcgcgcaagcttggcttc
aacgccagccggaccatgcgcgttgcccaacagctttatgagggcatcaatatcggcaac
gagaccgtgggcctcatcagctatatgcgtaccgatgccgtcaatcttgccgaagaggcc
attgcctcgatccgtacttttatcgatggctactacggcagcgaattcgtccccgagacg
ccgcgccgctacaagaccaaaaccaagaacgcccaggaagcgcacgaagccatccgtcct
acggacatcgcgcgcaccccggaatccctccagggggtgctggaacgcgatctctggcgc
ctgtacgagctggtctggaagcgcagcatcgcctgccagatggcgcccgcgcgcctcgac
ctcgtcgccgtggatatggatgccgggacacactggaccctgcgcgccaacggctccatg
gtgaccttccccggcttcatggccgtctatcaggaaggtaaggacgacggcgacgaggat
gagaacaaccgcatcctgccgcccctcgatgtcggcgatgaaccccaggtactcggcgtc
gatcccgaacagcactttaccgagccccccctcgttacagcgatgccaccctggtcaaaa
ccctggaagcccacggcatcggccggccatccacctacgccagcatcattcagactctgc
agaaccgcgaatacgtcgccgtcgagcagcgccgattccatcccaccgacctcggccggg
tag
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