Acidithiobacillus ferridurans: AFERRID_14790
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Entry
AFERRID_14790 CDS
T05847
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj03030
DNA replication
afj03430
Mismatch repair
afj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AFERRID_14790
03430 Mismatch repair
AFERRID_14790
03440 Homologous recombination
AFERRID_14790
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afj03032
]
AFERRID_14790
03400 DNA repair and recombination proteins [BR:
afj03400
]
AFERRID_14790
Enzymes [BR:
afj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AFERRID_14790
DNA replication proteins [BR:
afj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AFERRID_14790
DNA repair and recombination proteins [BR:
afj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AFERRID_14790
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_2
DNA_pol3_beta_3
Motif
Other DBs
NCBI-ProteinID:
BBF65261
UniProt:
A0A2Z6IHH9
LinkDB
All DBs
Position
complement(1428851..1429948)
Genome browser
AA seq
365 aa
AA seq
DB search
MKITIDREDLLPILANMANIADRRPVQPILAHVLIEAAGQHCRFVATDLEVQLSADLDHP
VEAPGTCAVPARKLYDICRALPEHTPIEFHKDGEKLLLKAAKSRFTLHILPSDQFPYLST
HSSLCKGNGNAKTFREALAVVANTMAQNDARLFLNGVLVEVEGQELRLVATDGHRLAMMT
LPFASSLESGSYQAILPRKAVLELLRILDDGDIVLEMSDASFLLNDGTQQFACKLIDAKY
PDYRRVIPQGHPRFAILDRQAFKSALQQSDVLVSDRNPTTHLHLENDQMTLRSRNEEQEE
GEIQIPVEYQGDALDIAFNSRYLTDTTQIFPQESLRMRVKDSDSSAVFTPVDGNNPLYII
MPVRL
NT seq
1098 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatcaccatagatcgcgaagatcttctccccatcctggccaacatggccaatatt
gccgaccgacgcccggtacaaccgatcctggcccatgtccttatcgaagccgcaggccaa
cactgccgcttcgtcgctaccgatctcgaagtccagctttctgccgacctggatcacccg
gtagaggcgccgggcacctgcgccgtccccgctcgcaaactctatgacatctgccgggca
ttacccgaacacacccccatagaatttcataaagacggcgaaaagctgctcttgaaggcc
gccaagagccgctttaccctgcacatattgccatccgatcaatttccgtacctcagtacc
cacagcagtctctgtaagggcaacggcaatgccaaaacctttcgcgaagcgctcgccgtc
gtcgccaacaccatggcacagaacgacgcaaggctttttctgaacggcgtcctcgtcgag
gtggaaggtcaggaactgcgtctcgtagccaccgatggccatcgtctggccatgatgacc
ctgccttttgccagcagcctggaaagcggaagctaccaggccattctgccgcgcaaagcc
gtcctcgaactgctgcggattctcgatgacggcgacatcgtcctggaaatgtcggatgcc
agctttctgctcaatgatggtacacaacagttcgcctgcaagctcatcgacgccaaatat
cccgattaccgccgggtcatcccccagggacacccccgcttcgccatactggaccgccag
gccttcaaaagtgccttgcagcagagcgacgtcctggtcagcgaccgtaatccgaccacc
catctacatctggaaaacgaccagatgaccctgcgcagccgcaatgaggagcaggaggaa
ggcgaaatccagattcccgtcgagtatcagggcgacgccctggacatcgctttcaacagc
cgctatctgacggatacgacccagatattcccccaggaaagtttgcggatgcgggtcaag
gacagcgacagcagcgccgtttttaccccggtagacggcaataatcccctgtatatcatc
atgcccgtccgtctttga
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