KEGG   Acidithiobacillus ferridurans: AFERRID_16090
Entry
AFERRID_16090     CDS       T05847                                 
Name
(GenBank) DNA polymerase/3'-5' exonuclease PolX
  KO
K02347  DNA polymerase (family X)
Organism
afj  Acidithiobacillus ferridurans
Brite
KEGG Orthology (KO) [BR:afj00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:afj03400]
    AFERRID_16090
DNA repair and recombination proteins [BR:afj03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    AFERRID_16090
SSDB
Motif
Pfam: HHH_8 DNA_pol_B_thumb HHH_5 PHP HHH IMS_HHH DNA_pol_B_palm HHH_3 DUF763 RNase_P_p30
Other DBs
NCBI-ProteinID: BBF65391
UniProt: A0A2Z6IHT4
LinkDB
Position
complement(1544056..1545786)
AA seq 576 aa
MPVLNPDIARAFDEIADLLEIEDANPFRVRAYRTAARLVLGLTSDLKTMVEAGEDLTELP
GIGEDLAKKIIEIVTTGHCSFLEKLEKQTPPALTELLKVPGLGPKRVKALWHELDVETVD
QLTRAAREGRIRSIPGFGEKTEARILEALQAQIAAVPRFPIAVAAPYAAALVRYLRNVPG
VRRVVVAGSFRRGRDTVGDLDILATASADSPVMERFTAYEDVAEVFSQGTTRATVILRNK
LQVDLRAVDESAYGAALHYFTGSKSHNIAIRRMGQDIGLKVNEYGLFRGKERIAGDTEES
VYAAVGLPYIEPELRENRGEIQAARAGHLPKLVAMGDLRGDLHAHSKASDGHYSIRDMAA
AARAAGLEYLAITEHSRHLTVAHGLDPVRLRRQMDEIDTLNTELDGITLLKGIEVDILED
GSLDLPGGILSDLDLVVAAVHYRFDLPRGKQTARILKAMDNPHFTILAHPSGRLIGSRNP
MDVDMPRIIRHARERGCFLEINAQPERLDLVDIHARTAKEEGVLLAVNSDAHSIHDFDNL
RFGLQQAQRGWLEMKDVLNTRTLKELRPLLAATMSR
NT seq 1731 nt   +upstreamnt  +downstreamnt
atgcccgttctcaaccccgacatcgcgcgcgcattcgacgaaatcgccgatcttttggag
atcgaggacgccaacccctttcgggtgcgggcataccgcaccgccgcccgcctcgtgctg
gggctgaccagcgacctcaaaaccatggtggaggctggcgaggacctcaccgagctaccc
ggcatcggcgaggatctagccaaaaaaattatcgagatcgtcaccacgggacactgctcc
ttcctcgaaaaactggaaaaacaaaccccgccagcgctgacggagctgctcaaggtgccg
ggtcttggacccaagcgggtcaaggcactttggcacgaactggacgtggaaaccgtggac
cagctcacccgcgccgccagagaggggcgcattcgcagtatccccggttttggcgagaaa
accgaagcgcgcattctggaagcccttcaggcccagatcgccgccgttcctcgttttccc
atcgccgtcgccgctccgtatgccgccgccctggttcgctatctgcggaacgtacccggg
gtgcggcgagtggtggtggccggcagcttccggcgcggcagggatacggtgggcgacctg
gatatactggctacggcctctgcggacagtccggtcatggagcgcttcaccgcctatgag
gatgtggcggaagtgttctcccagggtaccacccgggccaccgtgatcctgcgcaacaag
ctccaggtggacctgcgcgccgtggacgaatccgcctatggtgccgccctgcattatttt
accggctccaagtcccacaacatcgccatccgccgcatgggtcaggatataggtctgaaa
gtcaacgaatatgggctttttcgcgggaaggaacggattgccggcgatacggaggagtcg
gtctacgccgctgtcggcctgccttatatcgagccggaattgcgggagaaccgcggcgag
atccaggccgcccgcgccggacatctgccgaaactggtggcgatgggcgatttacgcggt
gaccttcacgcccacagcaaggccagcgatggccactatagtatacgagacatggctgcg
gcggcccgggccgcgggtctggaatatctggctatcaccgagcacagccgccacctgacc
gtcgcccatggcctcgacccggtgcgtttgcgtcggcagatggatgagattgataccctc
aataccgaactcgacggtatcacgctcctcaagggcatagaggtagacattctggaagac
ggcagcctggatttacccggcggtatcctgtccgatctggacctggtggtggcggccgtg
cattaccgcttcgatctgcccaggggcaaacagaccgcacgcatccttaaggccatggac
aacccccatttcaccatcctcgcccaccccagcgggcgactcatcggcagccggaacccc
atggatgtggacatgccccgcatcatccgccatgcgcgcgagcgaggatgctttctggag
atcaatgctcagcccgagcggctggatctcgtcgatatccatgcgcggacggccaaggaa
gaaggggtgctgctggccgtcaattccgacgcccacagtattcacgacttcgacaacctg
cgttttggcctgcagcaggcgcagcgcggctggctggagatgaaggacgtgctcaatacg
agaacgctcaaggagttgcggcccctgctggcagcgaccatgagccggtag

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