Acidithiobacillus ferridurans: AFERRID_17690
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Entry
AFERRID_17690 CDS
T05847
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AFERRID_17690
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afj03019
]
AFERRID_17690
03110 Chaperones and folding catalysts [BR:
afj03110
]
AFERRID_17690
03029 Mitochondrial biogenesis [BR:
afj03029
]
AFERRID_17690
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
afj04147
]
AFERRID_17690
Enzymes [BR:
afj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
AFERRID_17690
Messenger RNA biogenesis [BR:
afj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
AFERRID_17690
Chaperones and folding catalysts [BR:
afj03110
]
Heat shock proteins
HSP60 / Chaperonin
AFERRID_17690
Mitochondrial biogenesis [BR:
afj03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
AFERRID_17690
Exosome [BR:
afj04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
AFERRID_17690
Exosomal proteins of other body fluids (saliva and urine)
AFERRID_17690
Exosomal proteins of breast cancer cells
AFERRID_17690
Exosomal proteins of colorectal cancer cells
AFERRID_17690
Exosomal proteins of bladder cancer cells
AFERRID_17690
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
BBF65551
UniProt:
A0A2Z6II85
LinkDB
All DBs
Position
complement(1702341..1703996)
Genome browser
AA seq
551 aa
AA seq
DB search
MPAKQVAFAEHAREKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASQASDEAGDGTTTATVLAQAIIREGLKAVIAGMNPMDLKRGI
DKSVVVVVEELKKQSKPCKTQKEVAQVGTISANSDDSIGKIIAEAMEKVGNEGVITVEEG
SGLANELDVVEGMQFDRGYLSPYFVNNQDKMVAELENPYILLHDKKISSIRDMLPILEQV
AKSSRPLLIVAEDVEGEALATLVVNTMRGIIKVAAVKAPGFGDRRKAMLEDMAILTGGRV
VSEEIGMKLESTTLADLGQAKKIVIDKENTTMIDGAGQQSEIKARVEQIRRQMEDASSDY
DREKLQERVAKLAGGVAVIKVGAGSEMEMKEKKARVEDALHATRAAVEEGIVPGGGVALV
RARQALKGFKTDNHDQDMGVAIIRRAIEEPLRQIVANAGGEGSVVLNKVVDGKDGYGYNA
ATDEYGDMFEMGVIDPTKVTRTALQKASSIAGLMITTEAMVTELPKKDDKAGGDMGGDMG
GMGGMGGMGGF
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgccagccaaacaagtagcctttgctgaacatgcccgcgagaagatgttgcgtggcgtt
aacgtactcgccgatgccgtcaaggtcaccttgggtcccaagggccgtaacgtggtactc
gacaagtctttcggtgcccccaccattaccaaggacggcgtctccgtcgccaaggaaatc
gaactggccgacaagttcgagaacatgggcgcgcagatggtgaaagaagtcgcctcccag
gcttccgacgaagccggtgacggcaccaccaccgccaccgttctggcccaggccatcatc
cgcgaaggcctcaaggccgtcatcgccggcatgaaccccatggacctgaagcgcggcatc
gacaagtcggtcgtcgtcgtcgtcgaagagctgaagaagcagtccaagccctgtaagacc
cagaaggaagtcgcccaggtaggcaccatctccgccaactctgacgactccatcggcaag
atcattgccgaagccatggagaaggtcggcaacgaaggcgtcatcaccgtggaagaaggc
tccggcctcgccaacgagctggacgtcgtcgaaggtatgcagttcgatcgcggctatctc
tccccctacttcgtcaacaaccaggacaagatggttgccgagctggagaatccctacatc
ctcctgcacgacaagaaaatttcctccatccgcgacatgttgcccatcctggagcaggtc
gccaagtccagtcgtccgctgctgatcgtggctgaggatgtcgaaggcgaagcgttggcc
accctggtcgtcaacaccatgcgcggcatcatcaaggtcgctgcggtcaaggccccgggc
tttggtgatcgtcgcaaggcgatgctcgaagacatggccatcctgaccggcggccgcgtg
gtctccgaagaaatcggcatgaagctggaaagcaccaccctcgccgatctcggccaggcc
aaaaagattgtcatcgacaaggaaaacaccaccatgatcgatggtgctggtcagcagagc
gagatcaaggcgcgcgttgagcagatccgtcgtcagatggaagatgccagctccgactac
gatcgcgagaagctccaggagcgcgtggccaaactggccggtggcgttgccgtcatcaag
gtcggtgccggttccgagatggaaatgaaggagaagaaggctcgtgtcgaagacgccttg
cacgctacccgtgcggccgtcgaagaaggcatcgtccccggcggcggtgtggcgctggtc
cgtgcccgtcaggcgctgaaaggcttcaagaccgacaaccacgaccaggacatgggtgtt
gccatcatccgtcgcgccatcgaagagccgctgcgtcagatcgtcgccaatgccggcggt
gaaggcagcgtggttctgaacaaggttgtggacggtaaagacggctacggctacaacgcc
gccaccgacgaatatggcgacatgttcgagatgggcgtcatcgacccgaccaaggtcacc
cgcaccgcgttgcagaaggcctccagcattgctggcctgatgattaccacggaagccatg
gtcaccgaactgccgaagaaagacgacaaggcaggcggcgatatgggtggtgacatgggt
ggtatgggcggcatgggtggaatgggcggcttctaa
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integrated database retrieval system
