Acidithiobacillus ferridurans: AFERRID_22280
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Entry
AFERRID_22280 CDS
T05847
Name
(GenBank) Ribonuclease 3
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
afj
Acidithiobacillus ferridurans
Pathway
afj03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
afj00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
AFERRID_22280
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afj03019
]
AFERRID_22280
03009 Ribosome biogenesis [BR:
afj03009
]
AFERRID_22280
03036 Chromosome and associated proteins [BR:
afj03036
]
AFERRID_22280
Enzymes [BR:
afj01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
AFERRID_22280
Messenger RNA biogenesis [BR:
afj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
AFERRID_22280
Ribosome biogenesis [BR:
afj03009
]
Eukaryotic type
90S particles
RNase
AFERRID_22280
Prokaryotic type
rRNA processing factors
AFERRID_22280
Chromosome and associated proteins [BR:
afj03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
AFERRID_22280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DND1_DSRM
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
BBF66010
UniProt:
A0A2Z6IJW2
LinkDB
All DBs
Position
2158392..2159072
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AA seq
226 aa
AA seq
DB search
MDALESLQQSVGYHFREQPLLLQALTHRSAGARHNERLEFLGDAALNFVVAAKLFARFPK
VSEGDLSRMRARLVREETLAEIAGKIALADSLILGPGEIRSGGARRDSIRADALEAVIGA
AFLDGGFSAAERIVAQLVEPLMTDDLGGEELRDPKTRLQEFLQGQGRPVPVYTLVAEKGQ
AHERRFVARCSVPGAEATEAEDGSRRKAEQQAAALMLVQLQVAVRG
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atggatgctttagaatctctgcaacaatcggtcggctatcatttccgtgagcagcccctg
ctgttgcaggcgctgacacatcgaagtgcgggcgctcgacacaatgaacggctggagttt
cttggggatgcggcactgaattttgtggtagcggcaaagctcttcgcccgctttcccaag
gtgagtgagggggatctgtcgcggatgcgggcacggctggttcgggaggaaaccctggcg
gagatcgccggaaaaatcgctttggccgactccctgatcctcggccccggagaaatacgc
agcggcggcgcccggcgggactccatccgcgccgatgccttggaggcggtgattggcgcg
gctttcctggatggcggctttagcgcggcggagcgtatcgtggcacaactggtcgagccc
ttgatgacggatgacctgggtggcgaagagttgcgcgatcccaaaacgcgcctgcaggaa
ttcctgcagggacagggacgtcctgttcctgtctatacgttggtggcggaaaaaggacag
gcccatgagcggcgtttcgtggcgcgttgcagtgtgcctggcgccgaagctaccgaagcg
gaggatggcagccggcggaaagccgaacagcaggcggcggcgctgatgctggtacaactg
caggttgccgtgcgtggatga
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integrated database retrieval system
