Agrilactobacillus fermenti: ACNAN0_03665
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Entry
ACNAN0_03665 CDS
T10827
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
afk Agrilactobacillus fermenti
Pathway
afk03420
Nucleotide excision repair
Brite
DNA repair and recombination proteins [BR:
afk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACNAN0_03665 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACNAN0_03665 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
nSTAND1
AAA_29
RsgA_GTPase
AAA_21
AAA_22
nSTAND3
AAA_33
AAA_23
DnaJ_CXXCXGXG
AAA_18
AAA_25
NACHT
AAA_14
APS_kinase
AAA_24
SLFN-g3_helicase
ATPase
Viral_helicase1
MMR_HSR1
AAA_15
cobW
RNA_helicase
Septin
DUF87
NB-ARC
MeaB
NTPase_1
PRK
FtsK_SpoIIIE
T2SSE
DUF463
Dynamin_N
Motif
Other DBs
NCBI-ProteinID:
XOU38009
LinkDB
All DBs
Position
761467..764301
Genome browser
AA seq
944 aa
AA seq
DB search
MANDKIVIHGARAHNLKNIDVTIPRDKLVVVTGLSGSGKSSLAFDTLYAEGQRRYVESLS
SYARQFLGQMDKPDVDSIDGLSPAISIDQKTTSKNPRSTVGTVTEINDYLRLLWARVGQP
ICPNDGTPITSQSVDQMVNKTLALPERTKIQIMSPIVRQKKGQHKKIFAQIQKEGYVRVR
VDGEVHDVSEDFDLDKNLKHDIDIVIDRLVIRDGIRSRLFDSLESALRLSDGYANVDVIG
GEPLIFSEHYACPICGFTVGVLEPRLFSFNAPFGACPDCDGLGMKLEVDPDLVVPDSSKT
LEEGALAPWNPISSQYYPNMLAQACAAFKIPMDKPFNKLTKKQQHTVLYGSDGKKFHFHY
QSDFGNVRDVDTAFEGVIPNVDRRYHETNSDFTREQMRLYMQELTCQTCHGKRLNRQALS
VKIAGQDIAEVSDYSIKDALPFFKALHFSEQNETIAKPILKEVSDRLSFLNNVGLDYLTL
SRSAGTLSGGEAQRIRLATQIGSNLSGVLYILDEPSIGLHQRDNDRLINSLKRMRDLGNT
LIVVEHDEDTMRAADYLIDVGPGAGDKGGQIMAAGTPKEVEQNPNSLTGQYLAGKKYISV
PTKRRKGNGKKIRLTGAAENNLKQITVDFPLGKFVAVTGVSGSGKSTLVNTILKKALAQK
LNHNSNKPGKYKKISGYQNIEKLVDIDQSPIGRTPRSNPATYTSVFDDIRGLFAQTNEAK
TRGYQKGRFSFNVKGGRCENCKGDGIMKIEMNFLPDVYVPCEVCHGKRYNSETLEVTYKG
KNIADVLDMTVDEALTFFEPIPKIRRKLQTIVDVGLGYITLGQSATTLSGGEAQRMKLAS
ELHKKSSGKNFYILDEPTTGLHTDDIKRLLNVLNALVDEGNTVLVIEHNLDVIKDADYVI
DLGPEGGDKGGHVVATGTPEQIAKVPESYTGKYLAPMLAKRQKQ
NT seq
2835 nt
NT seq
+upstream
nt +downstream
nt
atggctaacgataaaattgtaattcatggcgcacgtgcgcataacttaaaaaatattgat
gtgacgattcctagagataaattggtggtcgtgactgggttatcaggttccgggaaaagt
tcactggcctttgacactttgtatgctgaagggcaacgccgttatgttgaaagtttatct
tcctacgcacggcaatttttaggtcaaatggataaacctgatgtggattccatcgacggt
ttaagtccggcaatttcgattgatcaaaaaactacatcaaaaaatccacgatcaacagtg
ggcactgtcactgaaatcaatgactatttgcgacttttgtgggcacgcgtaggtcagcct
atttgccccaatgatggaacgccgattacgagccagtcagttgatcaaatggtcaacaag
acgcttgctttaccagaacgaacaaagatccaaattatgtcaccaatcgtgcgtcaaaaa
aaagggcagcataaaaaaatctttgctcagattcaaaaggaaggctacgtgcgtgtgcgt
gtggatggtgaagttcatgatgtctctgaagattttgacttagacaaaaatctaaagcat
gatattgatattgtcatcgatcgattagtgattcgtgatggtatccgttcgcgcttattt
gattcgttagagagtgctttgcggttaagtgatggttatgccaatgtggatgttattggt
ggtgaaccgttaatcttctctgaacattatgcttgcccaatttgtggttttacagtcggt
gttttggagccgcgtctcttttcctttaatgcaccatttggggcttgcccagattgtgat
ggccttggcatgaaattggaagttgatcccgacttagtagttcccgattctagcaagaca
ttagaagagggcgctttagcaccctggaatccgatcagttcgcagtattacccgaatatg
ctcgcccaagcctgtgcagcgtttaagattcccatggataaacctttcaataaattgacc
aagaaacaacaacacacagtcttatatggttcagacggcaaaaaatttcattttcattat
caaagtgattttggtaatgttcgggatgtggatactgcatttgaaggggtgattcctaat
gtggatcgccgctaccatgagaccaatagtgacttcaccagagagcaaatgcgcttgtac
atgcaggaattaacttgtcagacctgtcatggtaaacgtttgaatcggcaggcattgtcc
gttaaaattgccggtcaggatattgccgaagtgtccgattattcaatcaaagatgcatta
cccttttttaaggcattgcacttttctgaacaaaatgaaacgattgcgaagccaattcta
aaagaagtaagcgatcgactatcatttctaaataatgtgggtttggattatttaacattg
tctcgttcagcaggaacgttatctggcggtgaggcgcagcggattcgtttagctacgcaa
attggttctaatctatctggcgtattgtatattctagatgaaccttccattggcttacat
caacgtgataatgatcgtttgatcaattctttgaaacgcatgcgtgatttaggcaatact
ttgattgtggtggaacatgatgaagatacgatgcgtgcagcagattacttgattgatgtt
gggcccggtgccggtgataagggtggccagataatggcggctgggacgccaaaagaagtt
gagcagaatccgaattcattgacaggtcaatatttagcagggaaaaaatatatttcggtg
ccaacaaaacgccgaaaaggaaatggcaaaaagattcgattgactggtgctgcggaaaac
aacttgaagcagattacggtagactttcctttaggcaagtttgtggctgtaacgggtgtt
tccggttctggtaaatcgactttagtaaacaccatcttgaagaaggcattagctcaaaag
ttaaatcataattctaataaacctggtaaatataagaagatctcaggttatcagaatatt
gagaaattagtggatatcgatcaaagtccaattgggcggacaccacgtagtaatccggca
acctatacgagtgtctttgatgatattcggggtctatttgcgcaaacaaatgaagctaaa
acgcgggggtatcagaagggtcgcttctcatttaatgtcaaaggcggccgctgtgaaaat
tgtaagggcgacggtatcatgaagattgaaatgaattttctccctgatgtttatgtaccc
tgtgaagtttgtcatggcaaacgttacaattcagagactttagaagtcacttataaaggt
aaaaatattgcggacgtactggatatgaccgtggacgaagctttaactttctttgaacca
attcctaagatccggcgtaaattgcagacaatcgttgatgtcggtttaggctatatcact
ttgggacaatccgctacgactttatccggtggggaagcacagcgtatgaaattagcttca
gagctgcataaaaaatcttcgggtaaaaacttttatattttagatgaaccaacgacagga
ttgcatacagacgatatcaaacggcttttaaatgttttaaacgctttggttgatgagggt
aacacggttttagtgatcgaacacaacttggatgttatcaaagatgcggattatgtcatt
gatttaggacctgaaggtggcgacaaaggcggtcatgttgtagctactggtacgccagaa
cagattgctaaagtacctgaaagttataccggaaagtatctggcaccaatgttagccaaa
cgacaaaaacagtaa
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