Agrilactobacillus fermenti: ACNAN0_05625
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Entry
ACNAN0_05625 CDS
T10827
Name
(GenBank) 3'-5' exoribonuclease YhaM family protein
KO
K03698
3'-5' exoribonuclease [EC:3.1.-.-]
Organism
afk Agrilactobacillus fermenti
Brite
KEGG Orthology (KO) [BR:
afk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afk03019
]
ACNAN0_05625
Messenger RNA biogenesis [BR:
afk03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ACNAN0_05625
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Paralog
Gene cluster
GFIT
Motif
Pfam:
HD
tRNA_anti-codon
TraI_2
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
XOU38374
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All DBs
Position
1148401..1149339
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AA seq
312 aa
AA seq
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MGLLDYEVGDTIDQTVLIKNADIRTAKNGKPFIAFVFSDQTGTITGKMWGAKPEDIAQFT
QGKQVYLKGKRELYQTKPQVRIDKLTVLEEQTHSADNLVPQAPMAKADLEAVINEFVLEI
TEAKWNRIVRLLLKKYQTDFFTFPAAKTNHHAYLGGLAYHTVSMLKLGQTLSQSYQSINR
PLLYAATILHDLGKVIELTGAATTEYSLSGNLIGHIVLIDEQIVLACQELNYDLTDEKIL
LLRHTVLAHHGQLEFGSPERPKLLEAEVLHQIDELDASITMISNHLEHTKPGNFTPRISA
LEQRQFYRPHKM
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgggactattagactatgaagttggcgatacaattgatcaaacagtgttgatcaaaaat
gcagacattaggaccgccaagaatggcaagcctttcattgcttttgttttttctgatcag
actgggactataacgggaaaaatgtggggtgctaaacctgaagatattgcccaatttaca
cagggaaagcaagtttatttgaagggtaaacgagaactctatcaaactaagccccaggtg
cgaattgataagttaactgttttagaagaacaaactcattcggcggataacttagtacca
caagcacccatggctaaagcagatcttgaagctgtaatcaacgagtttgtgcttgaaatt
actgaagcaaagtggaatcgcattgttcgcttactattaaagaaataccagacagatttt
tttacttttccagctgccaaaaccaatcatcatgcttatcttggtggtttggcttatcat
acagtgagtatgttaaagttggggcagacactcagtcaatcctaccagagtattaatcgg
ccactactatatgctgctacaattctacatgatttagggaaagttattgagttaactggt
gcggcaacaactgaatactcgttaagtggcaacttaatcggacacatcgttttaattgat
gaacagatcgtattagcatgtcaggaactaaattatgatttaacagatgagaaaatactg
cttttgagacatacggtattggcccatcatggtcaattggagttcggctctcctgaacgg
cctaagcttttagaagcagaagttttgcaccaaattgatgaattagatgcttcaataaca
atgatttctaatcatcttgagcacacaaagcctggaaattttacaccgcgcatttcggca
ctggaacaacgccaattctatcggccccataaaatgtag
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