Agrilactobacillus fermenti: ACNAN0_07405
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Entry
ACNAN0_07405 CDS
T10827
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
afk Agrilactobacillus fermenti
Pathway
afk03030
DNA replication
afk03430
Mismatch repair
afk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ACNAN0_07405 (holA)
03430 Mismatch repair
ACNAN0_07405 (holA)
03440 Homologous recombination
ACNAN0_07405 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afk03032
]
ACNAN0_07405 (holA)
03400 DNA repair and recombination proteins [BR:
afk03400
]
ACNAN0_07405 (holA)
Enzymes [BR:
afk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ACNAN0_07405 (holA)
DNA replication proteins [BR:
afk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ACNAN0_07405 (holA)
DNA repair and recombination proteins [BR:
afk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ACNAN0_07405 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
AAA_assoc_2
CppA_N
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
XOU36356
LinkDB
All DBs
Position
complement(1511346..1512386)
Genome browser
AA seq
346 aa
AA seq
DB search
MASTMIKVDALNKQIKQHQAGSLYLVLGTEDHLINQVVSAFHGVLRPEERSMNFAQYDLT
NDSLGSAIDDASSVPFFGDHRLVFLTRPFFAMSENIKATVEQDVSILERYLKKPTPSTIL
VIFAHTHKLDGRKKIAKLLMKHAQVVDVQKIEARQVESTLDNYLSQHGFQINAEARTLLL
QRSDGDFSNIIDNLEKLFITASDKQITLPMVEDLVAPTLENNIFDLVDYVLHKNVTQALE
LYHDLLLNKEEPIKINSILLTQFRLLMQVKILTKKGLTQGDLTQVLKVHPYRIKLALQTA
RHFSMKDLKRAFLGLEENDYKMKSAQIDKQLLFELFMLKFADPVKQ
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
ttggcaagtacaatgataaaagtcgatgccttaaataaacagataaaacagcaccaagct
ggctcgctttatttagttctggggactgaagaccacttgatcaatcaagtagtgtctgct
tttcatggtgtgttacgccccgaagagcgttcaatgaattttgctcaatatgatcttaca
aatgattctttaggtagtgcaatcgacgatgcctcatcagtgcctttctttggtgaccat
cgacttgtatttttaacgcggcctttctttgcaatgtctgaaaatattaaggcaacggtc
gagcaggatgtatctattttagaacgttacttgaaaaaaccaacaccatcaacaatactc
gtcatttttgcacatacacataaactagacggccgtaagaagattgctaagttattaatg
aaacatgcacaggtcgttgatgttcaaaagatcgaggcacgacaagtcgaaagcactctg
gataattatctcagccaacatggttttcaaattaatgcagaagcaagaacactgctatta
cagcgttcagacggtgatttttctaatattattgataatttagagaagttgtttatcacg
gcaagcgataaacagatcacgctaccgatggttgaagatcttgttgcaccaacattggaa
aataatatttttgatttggtagattacgtgttgcataaaaatgtcacacaagcattggaa
ctttatcacgacttattattgaataaagaagaaccaattaaaattaatagtattttgtta
acgcagtttcgattattaatgcaagtcaagatcttaacaaagaagggcttaacgcaagga
gatttaacccaagttttgaaagttcacccttatcgcattaaacttgcattgcaaacagcg
cgccatttttccatgaaagatttaaagcgggcttttctaggcttggaagagaatgattat
aagatgaaatctgcacaaatagataagcaattgctattcgaattatttatgttaaaattt
gcagatccagttaagcaataa
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