Agrilactobacillus fermenti: ACNAN0_10775
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Entry
ACNAN0_10775 CDS
T10827
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
afk Agrilactobacillus fermenti
Brite
KEGG Orthology (KO) [BR:
afk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
afk03009
]
ACNAN0_10775 (rlmD)
Enzymes [BR:
afk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
ACNAN0_10775 (rlmD)
Ribosome biogenesis [BR:
afk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ACNAN0_10775 (rlmD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_15
TRM5-TYW2_MTfase
MTS
Methyltransf_25
Cons_hypoth95
PrmA
RrnaAD
Methyltransf_11
Ubie_methyltran
DOT1
Methyltransf_4
Motif
Other DBs
NCBI-ProteinID:
XOU36934
LinkDB
All DBs
Position
complement(2148885..2150261)
Genome browser
AA seq
458 aa
AA seq
DB search
MKTNLNTPVQKNQTLDLTAVDLSYDGLGVAKVDDFPIFIDNALPGEVVTAVITKVAKKYA
FAKTVAMVQSSPDRVDIKNRRYTQTGIAPLQHLAYPAQLKFKQQQIENLYQKAKLAIDVL
PTLGMTDPTHYRNKAQVPVRTVDGQPTVGFFQKRSHRLVPMTDFFIQDEKIDAAIAKLQD
LIRQFGISAYDEVNHQGVLRNIMIRRGYYTGEMMIVLITRTKELPERRELANAILAEIPD
VVSIIQNINGTKGNTILGHKERILWGKPNLRDELLGLKFDISALSFYQVNPTQTQVLYQK
AIEAANLSGDEVVIDAYSGIGTIGLSMAKHVRSVKGVEITPAAVTNANANAELNGITNAE
FVVGKAEEVLPQWAEEGMKADLIVVDPPRKGLAPEFIEAAIKVRPKKVLYISCNPATLAR
DLQAFAAAGYTAKQTQPVDMFPMTTHVESVTVLERTEK
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaatttaaatacaccagtacaaaagaatcaaacactagatcttacagcggta
gacttgtcttatgatgggttgggcgttgccaaagttgatgattttcccatcttcattgac
aatgctttacccggtgaagtggttacagcggtaattactaaagttgctaagaagtatgcc
ttcgctaaaacggtagcaatggttcaaagcagtcctgatcgtgtggatatcaaaaatcgg
cgttatacgcaaactggcattgcgcctttgcagcatttggcttatccagcacaattaaaa
ttcaaacagcagcaaattgaaaacttgtaccaaaaagcgaaattagccattgatgtttta
cctactttgggcatgactgacccgacgcattatcggaataaagcacaggtacccgtacgt
acggtggatggtcagccaacggttggtttctttcaaaagcggagccatcgcttggtgccc
atgacggactttttcattcaagatgaaaaaatcgatgcagccattgctaaattacaagac
ttgatccgccaatttggtatttccgcttatgatgaagtgaatcatcaaggtgttttacgg
aatatcatgattcgtcgagggtattatactggcgaaatgatgattgtcttgattacgcga
actaaagaattaccggaacgtcgggagttagccaacgctattttggcagagatccctgat
gtcgtcagcattattcaaaatatcaatgggaccaagggcaatacgattttagggcataag
gaacgtattttgtgggggaagcccaatcttcgtgacgaattattaggcttgaaatttgat
atctctgccttatcgttttaccaagtcaatcctacccagacgcaagtactgtatcaaaaa
gctattgaagctgctaatttaagcggtgatgaagttgtgatcgatgcttactctggtatt
ggcacgatcggtctctccatggccaaacacgttcgttcggtaaaaggggtagaaatcacg
ccagctgccgtaaccaatgccaacgctaacgctgaattaaatggcattacgaatgctgaa
tttgtggtgggcaaggctgaagaagtattgccgcaatgggctgaagaaggtatgaaagcc
gacttgatcgtggttgatccaccacgtaaaggcttagcaccagaatttattgaagccgca
atcaaagtccggcctaagaaagtactttatatcagctgtaatccggccacattagctcgc
gatttgcaggcatttgccgctgctggctatacagcaaaacaaacccagccggtagacatg
ttccccatgaccacccatgttgagagcgtaacggtcctcgaacgtacagaaaaatag
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