Anoxybacillus flavithermus: Aflv_0246
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Entry
Aflv_0246 CDS
T00790
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afl
Anoxybacillus flavithermus
Pathway
afl03420
Nucleotide excision repair
afl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aflv_0246 (pcrA)
03430 Mismatch repair
Aflv_0246 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_0246 (pcrA)
Enzymes [BR:
afl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aflv_0246 (pcrA)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aflv_0246 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Aflv_0246 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
Viral_helicase1
AAA_30
AAA_11
ResIII
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
ACJ32630
UniProt:
B7GFV0
LinkDB
All DBs
Position
269088..271268
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AA seq
726 aa
AA seq
DB search
MVVKKMSMSAHMLLEGLNEKQKEAVKTTEGPLLIMAGAGSGKTRVLTHRIAYLMAEKGVA
PWNILAITFTNKAAREMKERVERIVGKQAEDIWISTFHSMCVRILRRDIDRIGIHANFSI
LDPTDQLSVLKHILKDRNIDPKKYDPRALLGAISSAKNDLVTPEKYAEQAANPYEKLVAE
VYQEYQKRLLRNHALDFDDLIMTTIQLFQRVPEVLEYYQRKFQYIHVDEYQDTNRSQYLL
VNMLAKRFQNLCVVGDSDQSIYRWRGADISNILSFEKDYPNAKVILLEQNYRSTKRILQA
ANAVIEHNTQRKPKKLWTENSEGHALVYYEAMTEVDEAQFVVGKIKEYVDAGKRTYKDFA
VLYRTNAQSRVLEEMLLKANIPYKIVGGLKFYDRKEIKDILAYLRLIANPNDDISFTRII
NVPKRGIGASTIDKIAAYASSQGISMFDALGSIEEMGISARIAAPLVQFREQIHHWSQMQ
HYLSVTELVEDVLDRSGYRDMLREEKTLEAHSRLENIDEFLSVTQHFEQVNEDKSLVAFL
TDLALVADIDQLDNDSEGQTNDAVVLMTLHSAKGLEFPVVFLVGLEEGIFPHNRSLNDED
EMEEERRLAYVGITRAEEKLFLTRAHMRTLFGQTHVNAPSRFIDEIPEELIEYAHKRVKK
SSASVRPSTASQGEWRVGDKVSHKVWGVGTIVRVKESDGDQELDVAFSSPIGIKRLLAKF
APITKV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
ttggtggtgaaaaaaatgagtatgtcagcacatatgctgttggaaggattaaatgaaaaa
caaaaagaggctgtgaaaacgacagaaggtccgcttttaatcatggcgggagcaggaagt
ggcaaaacgcgcgtattaacgcatcgcatcgcctatttaatggcggaaaaaggcgttgct
ccgtggaacattttagcgattacgtttacaaacaaagctgcacgtgaaatgaaagaacgc
gtggagcgcatcgtcggaaagcaagcggaagatatatggatttcgacgtttcattcgatg
tgcgtccgcattttacgacgtgacatcgatcgcattggcattcatgcgaacttttctatt
ttagacccgaccgatcaattatcggtgttaaaacatattttaaaagatcgcaatattgat
ccgaaaaaatacgatccacgtgcgcttttaggtgcgattagtagcgcgaaaaacgatttg
gtgacaccagaaaaatatgccgaacaggcagcaaacccatatgaaaagcttgtagcggaa
gtgtatcaagaatatcaaaaacgattgctgcgcaatcatgcgcttgattttgatgattta
attatgacgacgatccaattatttcaacgcgttccggaagtgttggaatattatcaacga
aagtttcaatacattcatgtcgatgaatatcaagatacgaaccgttcgcaatatttgctt
gtgaacatgcttgcaaaacgttttcaaaacttatgtgtcgtcggggattccgatcagtcc
atttatcgttggcgcggtgccgacattagcaacattttatcgtttgaaaaagactatccg
aatgcgaaagtgattttgcttgaacaaaattaccgctcaacgaagcggattttacaggca
gcgaatgcggtcattgaacataacacgcaacgaaaaccgaaaaaactttggacagaaaat
agtgaaggacatgcgcttgtctattacgaagcgatgacggaagtcgatgaagcgcaattt
gtcgttggaaaaattaaagaatatgttgatgccggaaaacgaacgtataaagattttgcg
gttttatatcggacgaatgcgcaatcgcgcgtacttgaagaaatgttattgaaggcaaac
attccatataaaattgtcggtgggttaaaattctatgaccgaaaagaaattaaagacatt
ttagcgtatttacgtttaatcgcgaatccaaacgatgacattagtttcacgcgcattatt
aacgtaccaaagcgcggcataggggcatcgacaattgataaaattgcagcatatgcttcg
agtcaagggatatcgatgtttgatgcgcttggttccattgaagaaatggggattagcgct
cgcatcgctgcaccgctcgtacaatttcgcgaacaaattcatcattggagccaaatgcaa
cactatttatctgtaaccgagcttgtggaagatgtgctcgatcgctcgggttaccgcgat
atgcttcgcgaagaaaaaacgttagaagcacatagccgactagaaaacattgatgagttt
ttatcagtgactcaacattttgaacaagtaaatgaagataagtcgctcgttgcctttttg
acagacttggcgcttgtagcagatatcgaccagcttgataatgatagcgaaggacaaaca
aatgatgcggtcgttttaatgacactccattcagccaaaggattagagtttcctgtcgtc
tttttagtcgggctggaagaagggatcttcccacataaccgttcattaaatgatgaagat
gaaatggaagaagagcgtcgtttggcgtatgtcggcattactcgtgctgaagaaaaattg
tttttaacgcgcgcccatatgcgtacgctatttggacaaacgcatgtcaatgccccatct
cgttttattgatgaaattcctgaagaattgattgaatatgcgcataaacgagtgaaaaaa
tcatccgcatctgtgcgtccatctactgcttcgcaaggggaatggcgcgtgggggataaa
gtgagtcataaagtatggggagttggcacaatcgttcgtgtcaaagaaagcgatggcgat
caagaactagatgttgctttttcaagcccaattggaattaaacgactattggcgaaattt
gctccgattacgaaagtgtag
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