Anoxybacillus flavithermus: Aflv_2229
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Entry
Aflv_2229 CDS
T00790
Symbol
sbcD
Name
(GenBank) DNA repair exonuclease, SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
afl
Anoxybacillus flavithermus
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_2229 (sbcD)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
Aflv_2229 (sbcD)
Archaeal homologous recombinant proteins
Aflv_2229 (sbcD)
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Motif
Pfam:
Metallophos
Metallophos_2
SbcD_C
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
ACJ34588
UniProt:
B7GM50
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Position
complement(2205042..2206241)
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AA seq
399 aa
AA seq
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MMAPYSCRWRWIDVRILHTADWHLGKTLEGRSRLPEQEAVIDEMVEIVQKENIDVVLLAG
DAFDTVNPPADAEKLFYEALSRLSDYGKRHVVVIAGNHDHPGRLSAAAPIANMHAITLLG
FPTDRVQQIHVPSSDEMLMVGALPYPSEARLNELLAEECDEALLRARYDERIRAIFAKMN
ESFREDAVNIAMSHLYVAGGATCDSERPIELGGAYTVSPASFPARAQYVALGHLHRPQDV
KHAMMRARYSGSPLAYSFSEAGYSKSVTIIDVQPRCTPIISEYLLSKGRPLVKWRAEGLA
QVYRWIEEGRDRGAWIDLEIDVEQSLTLEETHRLRKLYDGFVHIRPNYLKKEEIVREVHT
DVPIETLFTRFYERQTGGGKPSEEIVQLFLQLVAEEDEQ
NT seq
1200 nt
NT seq
+upstream
nt +downstream
nt
ttgatggcgccctactcgtgccgatggaggtggattgatgtgcgtattttacatacagcc
gattggcatttaggaaaaacgttagaaggacggagccgccttcctgagcaagaagcggtc
atcgatgaaatggtcgaaatcgtacaaaaagaaaacattgatgtcgtattgcttgcaggc
gatgcgttcgatacagtcaatccgcctgctgatgcggaaaagcttttttacgaagcgctt
tcgcggctaagtgattatggcaagcgtcacgttgtcgtcattgcaggaaatcacgatcac
ccggggcgtttaagcgctgccgctccgattgcaaatatgcacgctattacgttgctaggt
tttccgaccgatcgtgtgcaacaaattcatgttccatcaagcgatgagatgttaatggtc
ggagcgcttccatatccgtcagaggcgcgattgaacgaactgttggcagaggagtgcgac
gaagcgttgttgcgtgcacgatatgatgaacgcattcgagccatttttgcgaaaatgaat
gaatcgtttcgagaggatgcggtgaatattgcgatgagtcatttatatgttgcaggcggg
gcaacgtgcgactccgagcgtccgattgagcttggtggggcgtatacggtatcgccggca
agcttccctgcgcgcgcgcaatatgtcgcactcggtcatttgcatcgcccgcaagatgta
aaacatgcaatgatgcgcgctcgttattctggctcaccgcttgcttacagtttttccgaa
gcgggatacagcaagtctgtcacaatcattgacgtgcagccacgttgcacaccgatcatt
tcagaatatttattgtcaaaaggacgtccgcttgtgaaatggagggcagaagggcttgcg
caagtgtatcgttggattgaggaagggcgcgatcgcggcgcgtggattgatttggaaatt
gatgtcgagcaatcgttaacgttagaagaaacacatcgactacgcaaattgtatgatgga
tttgttcatattcgtccgaactacttaaagaaagaagaaatcgttcgtgaagtgcatacc
gatgtgccaatcgaaacgttatttacgcgtttttatgaacgacaaacaggtggaggaaaa
ccgtccgaagagatcgttcaactatttttacagctcgttgccgaggaggacgaacaatga
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