Anoxybacillus flavithermus: Aflv_2230
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Entry
Aflv_2230 CDS
T00790
Symbol
addA
Name
(GenBank) ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains)
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
afl
Anoxybacillus flavithermus
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_2230 (addA)
Enzymes [BR:
afl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aflv_2230 (addA)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
Aflv_2230 (addA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
Viral_helicase1
AAA_12
DEAD
AAA_11
ResIII
AAA_30
AAA_22
DUF7547
FtsK_SpoIIIE
DUF2059
Motif
Other DBs
NCBI-ProteinID:
ACJ34589
UniProt:
B7GM51
LinkDB
All DBs
Position
complement(2206204..2209833)
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AA seq
1209 aa
AA seq
DB search
MIPPKPRESQWTDEQWQAIYATGQHTLVAAAAGSGKTAVLVERIIQKILHKERPIDVDRL
LVVTFTNAAAAEMRQRIGEALERALEKEPHSLHLRRQLSLLQKASISTIHSFCLDVIRKY
YYVIGIDPVFRIADEGEMALLKEEVLETLFEQYYAENDEPFLTVVDRYTSDRTDADLQTL
ILRLYEFSRSHPNPSGWLQQIVHMYDVEEGARIDDLPYAHYLFQAVDLALEAAEYRLAQA
LQKTKEPGGPDYLYDTLASDEQVIAKLKEARHESWQQLHEAMKNVSFATAKRKPKDGAYD
EQLVEDVKKLRDQVKKEISSITEELFSFQPVTYVRHLHEMKPIVTTIVQMVQRFAHLLQA
KKDEKGIVDFSDLEHYCLRILRAPSLEHELKPSEAALYYRAQFAEVLVDEYQDTNMVQES
ILRLVSNDDEATGNMFMVGDVKQSIYGFRLAEPSLFLQKYNRFTKDGDGGLRIDLAKNFR
SRKEILDGTNFIFRQLMTETVGDMRYDDDAALRFGAQDYPDKQIPVECVWINEAKEESDE
EEQEDVTAVQLEARWIAKKIKQLLAEPFFVYDRRLKGERRLMYRDIVILCRSMSSASAML
EEFRKQNVPVYAELSSGYFSATEVSIMLSLLKVIDNPYQDIPLAAVLRSPIVGLDEEALA
RIRLAKKDGAFYEALCAFVQEPHDDELHEKMKRWLASLSEWRTAARQKPLADLIWQLYRE
TNFYDYVGGMPGGKQRQANLRALYDRAKQYEQTSFRGIFRFLRFIERLKEREDDFGAARS
LTEQEDVVRMMTIHKSKGLEFPVVFLAGAAKSFNMQDLRSDYVLDKDFGLGMRFVHPTWR
ASYPTVAQLAIKKKMKWQLLAEEMRILYVALTRAKEKLYIVCTAKDMEAKKKKWQEVAYT
STWELPAYVIEKAKSYADWIGYALARHQQGICSSATVLHDPSLWDIHIVPAHELEQEDAQ
ANEHRDIVEAIQQLQPVAIKSEYEEEVNRRLFWTYTHAPATVLRAKQSVSELKRQRDIYG
GHAEQPFRKELVERPRFLQAKMMTPAERGTMMHLVMQHVDVTKEVTVDAVREQIARMVNG
EWLTEEQATVIDVESIVAFFNTPIGKRMQRATRLEREVPFYLAHEMEGETVVVQGVIDCV
FEDEHGLVLIDYKTDRVSWMNDPKQQLKRRYKGQLALYREAIEAIWKREVTETYVYAFDG
ALLVPMEVD
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
gtgattccgccaaaaccacgagaaagtcaatggacagatgaacaatggcaagcgatttac
gccacaggtcaacatacgctcgttgccgccgccgcaggatcaggaaaaacggcagtgctt
gtcgaacgcattattcaaaaaatattgcataaagagcggccgatcgatgtcgatcggttg
cttgttgtgacgtttacaaatgcggcagcggcggaaatgcgccaacgcattggggaagca
ttagaacgagcgcttgaaaaagagccacattcgcttcatttgcgcaggcagctcagtctt
ctgcaaaaggcatccatttcaacgattcattcgttttgtttagatgtcattcgcaaatat
tattacgtcatcggcatcgacccggtatttcgcattgcggatgagggagagatggcgcta
ttaaaagaggaagtgttagaaacgttatttgaacaatattatgcggaaaacgatgaacca
tttttaactgtcgttgatcgatatacgagcgatcgcacagatgcggatttacaaacgctt
attttgcggttatacgagttttcacgttcgcatccaaacccgagtggatggttgcaacaa
atcgttcatatgtatgacgtggaagaaggtgcgcgcatcgatgacttaccgtatgcccat
tacctttttcaagcggttgatttggcgcttgaagcagcagaatatcgcttagcacaggcg
ttacaaaaaacgaaagagccgggcggccccgattatttgtacgatacgctcgcaagtgac
gaacaagtcattgcaaagctaaaagaagcacgccatgagtcgtggcaacagctacatgaa
gcaatgaaaaacgtatcgtttgcaacggcaaaaagaaagccgaaagacggcgcatatgat
gaacagcttgtagaagatgtgaaaaaattgcgcgaccaagtgaaaaaagaaataagcagt
ataacggaggaattgttttcgttccaacctgtgacatacgtgcgtcatttgcacgaaatg
aagccgattgtgacaacgatcgtacaaatggtacaacggtttgctcatttgttgcaagcg
aaaaaagatgaaaaaggtatcgttgatttttctgacttagaacattactgtttacgcatt
ttacgtgctccttctctcgagcatgagctaaagccgtcagaggcggcgctttattatcgg
gcacaatttgcggaagtgctcgttgacgaatatcaagatacaaatatggtgcaagagtcg
attttacggctcgtatcgaacgacgatgaggcaacgggcaacatgtttatggtcggcgat
gtgaaacagtccatttacggctttcgtctagccgaaccgtcgctttttttacaaaaatat
aatcggtttacgaaagatggtgacggtggacttcgcatcgatttagcaaaaaactttcgc
agccgaaaagaaatattagacggcacaaattttatttttcgacaactgatgaccgaaacg
gtcggtgacatgcgttatgatgacgatgccgcccttcgctttggtgcgcaggattatcct
gacaaacaaatacctgttgaatgcgtatggataaatgaagcaaaagaagaaagcgatgaa
gaagaacaagaggatgtgacggccgttcagctcgaagctcgctggatcgctaaaaaaatc
aagcagttgcttgctgagccgtttttcgtttacgatcgtcgcttaaaaggagagcggcgt
ttaatgtatcgcgacatcgtcattttatgccgttcgatgtcatccgcttcagcgatgtta
gaagaatttcgtaagcaaaacgttcccgtatatgctgagttatcgagcggttatttttct
gcgacggaagtgtcgatcatgttgtcgcttttaaaagtcattgacaatccgtatcaagac
attccacttgcggcggtgcttcgctctccgattgtcggcttagacgaagaagcgttggcg
cgcattcgcttagcgaagaaagatggagctttttatgaggcgttgtgcgcttttgtacag
gagccacatgatgatgaactgcatgaaaaaatgaaacgttggcttgcgtccttatcggaa
tggcgcacagcggcgagacaaaaaccgcttgcggacttgatttggcaattgtatcgagaa
acaaatttttacgattacgtcggtgggatgcctggcggaaaacagcgacaagcgaatttg
cgcgcgttatacgatcgagcaaaacaatatgaacaaacatcgtttcgcggcattttccgc
tttttacgatttattgagcggctaaaagaacgggaagacgatttcggtgctgcccgctca
ttgacagaacaagaagacgttgtgcgcatgatgacgattcataaaagtaaagggcttgag
tttccggtcgtctttttagcaggtgcagcaaaatcgtttaatatgcaagatttgcgcagc
gactatgtattagataaagatttcggactagggatgcgcttcgtccatccgacgtggcgc
gcaagctacccgacggttgcacaattggcgataaagaaaaaaatgaaatggcaactgcta
gcggaagaaatgcgtattttatatgtcgcgttaacgcgagcaaaagaaaaattgtacatc
gtctgtaccgcaaaagatatggaagcgaaaaagaaaaaatggcaagaagtcgcttacaca
tccacgtgggaacttcctgcgtatgtcattgaaaaagcaaaaagctatgcggattggatt
ggctatgcattagctcggcaccaacaagggatatgctcgtctgcaacagtacttcatgat
ccatcattatgggatatacacatcgtgccagcccatgagcttgaacaagaagacgcgcaa
gcgaatgaacatcgtgacatcgtagaggcgattcaacagctgcaacctgtggcgatcaaa
agtgaatatgaagaagaagtgaatcgtcgtctattttggacgtacacgcacgctcctgcg
actgtgttaagagcaaaacaaagcgtatcggagttaaagcggcaacgtgacatatacggt
ggacatgcagaacagccgtttcgaaaagagcttgttgaacgtccgcgctttttgcaagcg
aaaatgatgacgccagcggagcgaggaacgatgatgcaccttgtcatgcaacatgttgat
gtcacaaaagaagtgacggtggatgcggtgcgggagcaaatcgcgcgcatggtaaacggt
gaatggttaacggaagaacaggcaacggttattgatgtagaaagcatcgtcgcttttttc
aacactccgattggtaaacgaatgcaacgtgcgactcggcttgaacgggaagtaccgttt
tatttggcgcacgaaatggaaggggaaacagtggtcgttcaaggggttattgattgcgtg
tttgaagatgaacatgggctcgttttaattgactataaaaccgatcgcgtgtcatggatg
aacgacccgaaacaacaattaaaacgacgatataaagggcaattggcgttatatcgggaa
gcgattgaagcgatttggaaaagggaagtaaccgaaacgtacgtgtacgcttttgatggc
gccctactcgtgccgatggaggtggattga
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