Anoxybacillus flavithermus: Aflv_2237
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Entry
Aflv_2237 CDS
T00790
Symbol
pcrA
Name
(GenBank) ATP-dependent DNA helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
afl
Anoxybacillus flavithermus
Pathway
afl03420
Nucleotide excision repair
afl03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aflv_2237 (pcrA)
03430 Mismatch repair
Aflv_2237 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_2237 (pcrA)
Enzymes [BR:
afl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Aflv_2237 (pcrA)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aflv_2237 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
Aflv_2237 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
Viral_helicase1
UvrD_C_2
AAA_22
AAA_11
DEAD
Motif
Other DBs
NCBI-ProteinID:
ACJ34594
UniProt:
B7GM56
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All DBs
Position
2218097..2219908
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AA seq
603 aa
AA seq
DB search
MDLYNEKLNQIKSDKEQYEAYLSEDSTVVIAGPGSGKTTVLTLKILRLLKEYIRPPRGLA
CVTFSKAAAKEIKDRLNAFGYQQRDNVFLGTVHSFCISEIISPFAHLYNYDIPLPLRIVS
EKKRKSLFKQIISDFELEHLGLSIEEMDKERTLNIEGISEVEVPTYDLALRVAIEYEKRL
HTNGLVDFVDIVKYATTLIQNQEYVRKCLEAKFPWVLIDEYQDLGKPLHEMVLSLFYKTN
IKIFAVGDPDQSIHGYNGAIPDYLIELYHNPSITQIQLKTNYRSNQDIIDASELALQDKR
GYKAGARLGENAEFHFITCEEEMFDQYVKVAKEIIPSCREAGIPLEEIAIMVGSNKHAKE
LGRILDESGVPFYITKFDFQRSDVVLWLERCAIWCVDKSKQSFNELVGFWINLHKIHDRP
LLSKEQILFRRRLFDTLTSSIKHIDDLGKWLTFVVNELELSSLLTDSPVYPDELENLNKL
MKLTIEGEFRDYDLSKFGKLGKPGNQVTITTRHGSKGLEFEVVILLGMEEDHFPSYWNKQ
DEKRLSEEHRVFFVCVSRAKRVCYLLRSQKYTKKTKYGLKKFDYAPSRFWELLYARYGEK
THV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
atggatttatataatgaaaaacttaatcaaattaaaagtgataaagaacaatacgaagca
tatctgtctgaagatagtaccgttgttattgcaggacctgggagtgggaagacaactgta
ttaactttaaaaattttgaggttgttaaaagaatatatacgccctccacgaggattggct
tgtgttacttttagtaaagctgccgcaaaagaaataaaagatcgtttgaatgcctttggc
taccagcaaagggataatgtttttctaggaactgttcactcgttttgtatatcggaaatt
atatccccctttgctcatttatacaattatgatatcccattgcctttaagaatcgtttct
gagaaaaagagaaaatctctctttaaacaaataatttctgactttgaattggaacacctt
gggttgagtattgaagaaatggataaagaaagaactcttaacattgaggggattagtgag
gttgaagtacctacgtatgatcttgcattaagggtagccattgagtatgaaaaacgactt
catacgaatggattggtagattttgtggacattgtaaaatatgctaccacccttatacaa
aatcaagaatacgttagaaaatgtttagaggcaaaatttccttgggtactaatcgatgaa
taccaagatcttgggaaaccacttcatgaaatggtactttcactcttttataaaaccaat
attaaaatctttgcagtcggtgaccctgatcaatctattcatggttataatggagcaata
cccgactatttaattgaattgtatcacaacccgtctataacacaaattcaattaaaaact
aattacagaagtaatcaggacattattgatgcatctgaattagcacttcaagataaacgg
ggctataaagctggagcaagattaggagaaaacgcagagtttcattttattacttgcgaa
gaggaaatgtttgatcaatacgttaaagttgctaaagaaattattccatcctgcagggaa
gctggaatccccttagaagaaatagcaattatggttggttccaataaacatgcaaaagag
cttggacgtattttagatgaatcaggtgtcccattttatatcacgaaatttgatttccaa
aggtctgacgttgttctttggcttgagagatgtgctatatggtgtgtggacaagtccaaa
caatctttcaatgaattagttgggttttggattaatcttcataaaatacatgaccgtcca
ttattatcaaaggaacaaattttgtttagacgaagattgtttgataccttaacatcaagt
attaagcacatcgatgacttaggtaagtggttaacatttgtggtcaacgaacttgaacta
tcatcattattaactgactcacctgtttatccagatgagctagaaaatctaaataaatta
atgaaattaacaattgaaggggaatttcgagattacgatttgtccaagttcggaaaactt
ggtaaacccggaaatcaagttaccatcaccacaaggcatgggtcaaaaggattagagttt
gaggtggttattttgttgggaatggaagaagatcattttccatcttattggaataagcaa
gatgaaaagagattaagtgaagagcatagagttttctttgtatgtgtcagccgagctaaa
cgcgtatgctatcttttaagatcgcaaaagtatacaaaaaaaaccaaatacggattaaaa
aaatttgattacgcaccatcccgtttttgggaactgttatacgctagatacggtgaaaaa
acccatgtataa
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