Anoxybacillus flavithermus: Aflv_2547
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Entry
Aflv_2547 CDS
T00790
Symbol
uvrB
Name
(GenBank) Excinuclease ABC (subunit B, helicase)
KO
K03702
excinuclease ABC subunit B
Organism
afl
Anoxybacillus flavithermus
Pathway
afl03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
afl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Aflv_2547 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
afl03400
]
Aflv_2547 (uvrB)
DNA repair and recombination proteins [BR:
afl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Aflv_2547 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Aflv_2547 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
UvrB
Helicase_C
ResIII
UVR
DEAD
UFL1
AAA_22
TrwB_AAD_bind
AAA_7
AAA_30
AAA_16
AAA_19
UB2H
AAA
HAD_Pex22
AAA_25
Motif
Other DBs
NCBI-ProteinID:
ACJ34902
UniProt:
B7GL57
LinkDB
All DBs
Position
complement(2522417..2524390)
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AA seq
657 aa
AA seq
DB search
MSAFQLVSAYEPRGDQPKAIAKLVEGIQQGKKHQTLLGATGTGKTFTISNVIQQVNKPTL
VIAHNKTLAGQLYSEFKQFFPNNAVEYFVSYYDYYQPEAYVPQTDTYIEKDASINDEIDK
LRHSATSALFERRDVIIIASVSCIYGLGSPEEYRELVVSLRVGMEIERDHLLRRLVDIQY
ERNDIDFRRGTFRVRGDVVEIFPASRDEHCIRIEFFGDEIERIREVDALTGYVMAEREHV
AIFPASHFVTREEKMKLAIENIEKELEERLCELREQGKLLEAQRLEQRTRYDIEMMKEMG
FCSGIENYSRHLTLRPPGSTPYTLLDYFPDDFLIVIDESHVTLPQIRGMYNGDKARKEVL
VEHGFRLPSALDNRPLTFEEFEQKVNQVIYVSATPGPYELEHCREVVEQIIRPTGLLDPT
IDVRPIAGQIDDLVDEIQKRIACNERTLVTTLTKKMAEDLTDYLKDIGIQVAYLHSEIKT
LERIEIIRDLRLGKYDVLVGINLLREGLDIPEVSLVAILDADKEGFLRSERSLIQTIGRA
ARNANGHVIMYADTITKSMEIAINETKRRRAIQEAYNREHGIVPKTIQKDIPDVIRATFA
AEEKETYETKDVRHLSKEERVALIAKLEQEMKEAAKALHFERAAELRDLILELKAEV
NT seq
1974 nt
NT seq
+upstream
nt +downstream
nt
gtgagcgcatttcaattagtatccgcttatgagccgcgcggcgatcagccgaaagcgatt
gcgaagcttgtcgaagggattcagcaagggaaaaagcatcaaacgttgcttggggcaaca
ggaacaggaaaaacgtttacgatttcaaacgtcattcaacaagtaaataaaccgacgtta
gtcatcgctcataataaaacgttagcgggtcagttatatagcgagtttaaacaatttttc
ccgaacaacgctgttgaatattttgttagctattacgattattatcagccggaagcgtac
gtgccgcaaacggatacgtacattgaaaaagatgcgagcattaacgatgaaattgataaa
ttgcgccattccgcgacgtctgcgttatttgagcggcgcgacgtcattattatcgcaagc
gtttcatgcatttacggcttaggttcaccggaagaatatcgcgaacttgtcgtttcgctt
cgcgtcggtatggaaatcgagcgcgatcatttgcttcgtcgccttgtcgacattcaatac
gaacgaaacgatattgattttcgccgtgggacgtttcgggtgcgcggagatgtcgttgaa
attttcccagcttcgcgcgatgagcattgtattcgtattgaatttttcggtgatgaaatt
gagcgtattcgcgaagtagatgcgttgacgggatatgtgatggcggaacgagaacatgtg
gcgatttttccagcctctcacttcgtcacgcgcgaagaaaaaatgaaactggcgattgaa
aatattgaaaaagaacttgaagagcggctttgtgagctgcgcgagcaaggaaaattgctt
gaagcgcaacggttagaacagcggacgcgctacgatattgaaatgatgaaagaaatgggc
ttttgttcaggcatcgaaaactattcgcgccatttaacgttgcgaccgcctggctcaacg
ccttatacgttattagactattttcctgacgattttttaattgtcatcgatgaatcgcac
gtcacattgccgcaaattcgtggcatgtataacggcgacaaagcgagaaaagaagtgctt
gtggaacatggcttccgtttgccgtccgcgttagataaccgtccgctgacgtttgaagaa
ttcgaacaaaaagtgaatcaagtcatttacgtctctgccacaccgggtccgtatgagcta
gaacattgccgagaagttgtcgagcaaattattcgtccgaccggattgttagatccgacc
attgatgtacgtccaattgcaggacaaattgacgatttagtcgatgagattcaaaagcgg
atcgcttgcaatgaacgaacgcttgtgacgacgttgacgaaaaaaatggcagaagacttg
accgattatttaaaagatatcggcattcaagttgcttatttgcattcagaaattaagacg
ctcgaacgtattgaaattattcgtgatttacgattaggtaaatatgatgtgctcgtcggc
attaacttattgcgagaagggctagatattcctgaagtgtcgcttgtggcgattttggat
gcggataaagaaggatttttacgttctgaacgttcgcttattcaaacgattggacgggcg
gcgcgcaatgcaaacggtcacgtcattatgtatgcagatacaatcacaaaatcgatggaa
atcgcgataaacgaaacgaagcggcgtcgcgccattcaagaagcgtacaatcgcgagcac
ggcatcgtgccaaaaacgattcaaaaagacattccagatgtcattcgtgcgacatttgct
gcagaagaaaaagaaacgtatgaaacaaaagacgttcgccatttatcgaaagaagagcgt
gttgcgctcatcgccaaactggaacaagaaatgaaagaggcagcaaaagctcttcatttt
gaacgtgctgctgagctgcgcgatctcattttagaattgaaagctgaggtgtaa
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