Antarcticibacterium flavum: FHG64_00390
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Entry
FHG64_00390 CDS
T06005
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
afla
Antarcticibacterium flavum
Pathway
afla03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
afla00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FHG64_00390 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afla03019
]
FHG64_00390 (recQ)
03400 DNA repair and recombination proteins [BR:
afla03400
]
FHG64_00390 (recQ)
Enzymes [BR:
afla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FHG64_00390 (recQ)
Messenger RNA biogenesis [BR:
afla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FHG64_00390 (recQ)
DNA repair and recombination proteins [BR:
afla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FHG64_00390 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HTH_40
HRDC
RecQ_Zn_bind
Helicase_Sgs1
ResIII
Sigma70_r4_2
GerE
zf-CXXC
DUF2802
Motif
Other DBs
NCBI-ProteinID:
QCY67975
UniProt:
A0A5B7WY88
LinkDB
All DBs
Position
complement(88310..90415)
Genome browser
AA seq
701 aa
AA seq
DB search
MKEAQLLSTLKEYFGYDTFRPLQKKIIDAVFAGEDNLVIMPTGGGKSICYQLPAILLPGI
TLVVSPLIALMKDQVDGLTANGIPAAFLNSSQSSLEHQDIFTRVEAGELKLLYVAPESLQ
IIDRLLVPENLSLIAIDEAHCISSWGHDFRPAYTQLGYLKNRFPSTPVIALTATADKATR
KDIAQQLNIPGANKHIASFDRKNLSLEVRQGIKKFEQILNFVKTRKNESGIIYCLSRKST
EEIAARLKAKGIKAEAYHAGLGHEERIKIQDDFINDRQQVICATIAFGMGIDKSNIRWVI
HHNMPKNLEGYYQEIGRAGRDGLPSQTLLFHSYADVVQLQKFAANAKNEQVQLAKLERMK
QYSEAVTCRRKILLNYFGELKQEDCGNCDICKNPPQFFDGTLIAQKALSCIYRLKGGEPI
TIVIDVLRGAKNEGVLEKNYQKVKTYGVGAEISWRDWQQYLIQLINLGFIEIAFHHHNHL
RLTTLAKQVLFENQKVKLAKVPEKILSTPAETAEKEEKASTLFEKLRQLRLRIAREEDIP
AYHIFSDATLREMEKERPMTDEDFMQISGVGKKKMQDYGYQFIKEIIAFSKKKRSGKKTK
KSNTYKETQQLFQEGLGVEEIAQKRGLASTTIYSHLAKLYSDGEISNLEKLIDRQDLEAV
KKAKKQLDDPETLKPYYEHFQEALDYGTIRLALAVLEKEDS
NT seq
2106 nt
NT seq
+upstream
nt +downstream
nt
atgaaagaagcacaacttttaagcaccttaaaagaatattttgggtatgacaccttccgg
cccctacaaaagaaaattatagacgctgtttttgcaggggaagataacctggtcatcatg
cccacgggtggcgggaaatccatttgctaccagcttcctgcgatattactaccgggaatt
accctggtggtatctcctttaatagctttaatgaaagaccaggttgatggccttactgcc
aatggaattcctgctgcttttttgaatagtagccaaagttctcttgagcatcaggacatt
tttacccgggtggaagccggggagcttaagttgctgtatgttgctcctgaaagtctgcag
atcattgaccgcctcctggtcccggaaaaccttagcttaatcgccatagatgaagcccac
tgcatctccagctgggggcacgattttagaccggcctacactcagcttggctatttaaag
aaccgcttcccctctactcccgtgattgccctcactgcaacggccgataaagctacgcgg
aaggatattgcacaacaattgaatatccccggtgccaataaacatatagcttcttttgac
cgtaagaaccttagcctggaggttcgccaggggatcaaaaagttcgaacaaatcctgaat
ttcgtgaaaacccgaaagaatgagagcgggatcatctattgccttagccgcaagagcacc
gaggagatcgcagcaaggctgaaggctaaaggaataaaagccgaagcttatcacgccggg
ctggggcatgaagagcgcattaaaatacaggacgatttcatcaatgaccggcaacaggtg
atttgtgccaccattgcttttggaatgggaatagataaatccaatattcgctgggtgatc
caccacaatatgccaaagaacctggaaggttactaccaggaaattggccgtgcaggaagg
gatggcctgccgtcacaaaccctgctctttcatagttatgcagatgttgtacagctgcag
aagtttgccgccaatgccaaaaatgaacaggtacagcttgccaagctggaacgaatgaag
caatactctgaagcggttacctgcaggaggaagatcctgcttaattactttggcgaatta
aaacaggaggactgcgggaactgcgatatatgtaagaatcccccgcagttctttgacggt
actctaatagcacagaaggctctttcctgcatctacagattaaagggtggcgagcctatc
acgattgttatagatgttcttagaggtgctaagaatgaaggtgtgttggagaaaaactat
cagaaggtaaaaacctatggagttggtgccgaaatttcctggagggactggcagcaatat
cttatccagctcatcaacctgggtttcatagagatcgcctttcaccatcacaatcattta
agattaactacccttgccaaacaggtactttttgaaaatcaaaaggtaaaacttgccaaa
gttcctgaaaagatcttaagcacccctgcagagaccgcagagaaagaagaaaaagcctcc
accctctttgaaaaattaaggcagctgcgtcttcgtatagcaagggaagaagatattccc
gcctatcacatctttagtgacgcgacgcttcgggaaatggaaaaagaacgtcctatgaca
gatgaggattttatgcaaataagtggtgtgggtaaaaagaaaatgcaggattatggttac
cagttcatcaaggagatcatcgccttcagtaaaaagaaaagaagcggaaaaaaaaccaaa
aaaagcaatacctataaagaaacacaacagcttttccaggaaggtttaggtgtggaggag
atcgctcaaaaaagaggcctggcctcgacgaccatctattcacatctggccaaactatat
agtgatggggaaatttcaaatcttgaaaagctcattgatcggcaagaccttgaagccgtg
aaaaaggctaaaaaacaattagatgatcccgaaaccctgaagccttattatgaacatttc
caggaggcattagactatggaaccataagattggcgctggctgttttggaaaaggaagat
tcttaa
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