Antarcticibacterium flavum: FHG64_02480
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Entry
FHG64_02480 CDS
T06005
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
afla
Antarcticibacterium flavum
Brite
KEGG Orthology (KO) [BR:
afla00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afla03032
]
FHG64_02480
03400 DNA repair and recombination proteins [BR:
afla03400
]
FHG64_02480
Enzymes [BR:
afla01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
FHG64_02480
DNA replication proteins [BR:
afla03032
]
Prokaryotic type
DNA Topoisomerases
FHG64_02480
DNA repair and recombination proteins [BR:
afla03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
FHG64_02480
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
CarbopepD_reg_2
Motif
Other DBs
NCBI-ProteinID:
QCY68350
UniProt:
A0A5B7WZ63
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All DBs
Position
543462..544541
Genome browser
AA seq
359 aa
AA seq
DB search
MTLSPEDVNSLLENPSEATELANLTYIVEDRLSIQRKKVGRGFSYYKNGEKVKDQRTLER
IKSLVIPPAWTNVRICSIKKGHLQVIGRDEKNRKQYLYHPLWSKLRNQTKFFKMASFGKT
LPRIRKQVEQDLELPKMTRRKVLALVIRLMEETHIRIGNAYYARENKTYGLSTLRGKHLK
TDKNKIRFEFIGKKGKEQSVTIKNKRLIKLVNQCEEIPGWELFKFYDEDGDKTPIDSGMI
NEYIQDISGGDKFSAKDFRTWSASKIFFETLYELGYEEDEKRNKKNILTAYDTAAQGLGN
TRAVCREYYVHPSIVKNYETGEIVEHFKKVRVRKEKNYQTLSGTEKVMLKMIEDYQIDI
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgaccctttctcctgaagatgtaaattcccttttggaaaatccttccgaagccactgaa
ctggctaacctaacatatatagttgaagatagactttccattcagcgaaaaaaagtaggc
aggggcttttcctattataagaatggggaaaaggttaaagatcaaaggaccctggaacgc
atcaagagcctggtgatccccccggcctggaccaatgttaggatatgttcgatcaaaaag
ggacacctgcaggtaataggacgggatgaaaaaaacaggaagcaatacctatatcacccg
ctgtggtcaaagttacgtaatcaaacgaagttctttaaaatggcttcttttggtaaaacc
cttccccgcataaggaaacaggtagaacaggacctggagcttccaaaaatgacccgcagg
aaggtactcgcactggtgataaggcttatggaagaaacccatattcgaataggtaatgcc
tattacgcccgggaaaacaaaacctacggactttcgaccttaagaggaaaacaccttaaa
accgataagaataagataaggttcgaattcattggaaaaaaaggcaaggaacaatctgtt
accattaaaaataaacggcttattaaactggtcaaccaatgcgaggagatccccggctgg
gagttgtttaaattttatgacgaggacggggataaaactcccatagacagtgggatgatc
aatgagtatatacaggacattagtgggggcgataaattttcagccaaagattttcgcacc
tggtctgcgtccaagattttctttgaaaccctttacgaacttggatatgaagaagatgaa
aaacgaaataaaaaaaatatacttacggcttacgacacggcggcgcagggattagggaat
accagggccgtttgccgggagtactacgtgcatcccagtattgtaaaaaattatgaaacc
ggtgaaattgtagagcattttaaaaaagtacgggtgcgaaaagaaaagaattaccaaacc
ctctctggtactgaaaaggtaatgctgaaaatgatcgaggattaccagatagatatataa
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