Antarcticibacterium flavum: FHG64_04100
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Entry
FHG64_04100 CDS
T06005
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
afla
Antarcticibacterium flavum
Pathway
afla00521
Streptomycin biosynthesis
afla00523
Polyketide sugar unit biosynthesis
afla00525
Acarbose and validamycin biosynthesis
afla00541
Biosynthesis of various nucleotide sugars
afla01100
Metabolic pathways
afla01110
Biosynthesis of secondary metabolites
afla01250
Biosynthesis of nucleotide sugars
Module
afla_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
afla00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
FHG64_04100 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FHG64_04100 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
FHG64_04100 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FHG64_04100 (rfbB)
00525 Acarbose and validamycin biosynthesis
FHG64_04100 (rfbB)
Enzymes [BR:
afla01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
FHG64_04100 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
RmlD_sub_bind
NAD_binding_4
adh_short
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
QCY68642
UniProt:
A0A5B7X1R7
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All DBs
Position
complement(974143..975195)
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AA seq
350 aa
AA seq
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MSRKVLITGGAGFIGSHVVRLFVNKYPEYEIFNLDSLTYAGNLENLRDIEEAANYSFLKA
DINDAAGMNSLFEKHHFDSVIHLAAESHVDRSIKDALAFVRTNIIGTVNLLNAALAIWKE
DYSNKMFYHISTDEVYGTLGETGLFTEATAYDPNSPYSASKAGSDHFVRAYGETYGLPYI
ISNCSNNYGPNQFPEKLIPLFINNIIEEKPLPVYGDGKYTRDWLYVIDHATAIDLAIHKG
KNKETYNIGGFNEWQNIDLVETLCKLMDQKLEREEGSSAKLITFIQDRPGHDKRYAIDAS
KINKELGWEPSVTFEEGLEKTIDWYLNNGTWLKNVTSGAYREYYEEQYQK
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atgagtagaaaagttttaattacaggtggggctggttttattggttcccatgtggtgcgg
ttatttgtaaataaatatccggagtacgagatatttaatcttgattccctcacctatgcc
gggaatttggagaatctcagggatattgaggaggctgcaaactatagctttcttaaagcc
gatatcaatgatgctgccggaatgaactctctgttcgaaaaacaccattttgacagtgtg
atccacctggctgccgaatctcatgtggacaggtccattaaagatgcgctggcttttgtg
cgcaccaatatcataggaactgtaaatcttcttaatgctgccctggctatctggaaagaa
gattacagcaataaaatgttctatcacataagtacagatgaagtatatggaacccttgga
gaaacaggtttgtttacagaggccactgcctatgatccaaactcaccttattctgcttcc
aaagcgggatcagatcattttgtgagggcttatggcgaaacttacggacttccttatata
atttccaattgctccaataattatggtcctaatcagtttccggagaaactcattccctta
ttcataaataacatcattgaagagaaacccctgccggtttacggggacgggaaatatacc
cgggattggctttacgttattgatcacgcaacggcgatagatctggccattcataaagga
aaaaataaagagacctataatattggaggcttcaatgaatggcagaatattgatctggtt
gaaaccctttgcaaattgatggatcaaaagctggagcgggaagaaggaagttcagcaaaa
ctcatcaccttcattcaggaccgtcccggccatgataaaagatatgctattgatgcttca
aagatcaataaggagttaggctgggaaccctctgtaacttttgaagaagggctggagaag
accatagactggtatctaaataatggaacctggttgaagaatgttaccagtggagcgtac
cgggaatattatgaggagcagtatcaaaaatag
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