Antarcticibacterium flavum: FHG64_05105
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Entry
FHG64_05105 CDS
T06005
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
afla
Antarcticibacterium flavum
Pathway
afla03030
DNA replication
afla03430
Mismatch repair
afla03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
afla00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FHG64_05105
03430 Mismatch repair
FHG64_05105
03440 Homologous recombination
FHG64_05105
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
afla03032
]
FHG64_05105
03400 DNA repair and recombination proteins [BR:
afla03400
]
FHG64_05105
Enzymes [BR:
afla01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FHG64_05105
DNA replication proteins [BR:
afla03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FHG64_05105
DNA repair and recombination proteins [BR:
afla03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FHG64_05105
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
GIY_YIG_2
DEDDh_C
Motif
Other DBs
NCBI-ProteinID:
QCY68827
UniProt:
A0A5B7X0G7
LinkDB
All DBs
Position
complement(1216296..1217747)
Genome browser
AA seq
483 aa
AA seq
DB search
MKDQLFAVVDVETTGGGMSGNRLTEICIVLLKGNKVLDKYTSLINPEKPIPSYITALTGI
DNALVANAPRFHEVAKDIELMTRDAIFVAHNVNFDYNVLRNEFRELGFEFTRRKLCTVRL
SRKLIPGLFSYSLGRLCDSINIPITSRHRAEGDTDATVILFQRLLGLDTNFEVMRSFLHA
RSREATLPPHLEAEQIFDLPDDPGIYLFKDNKHKVIYAGKAINIKKRVISHFYDKGTKEY
KLGQETYHIDYETTGNELIALLLEAEKIKKHYPKFNRAQKRPGTVYQIISYTNQKGVIQL
ALGTTRTLNNSVGTFYNRLRAAEKLEQLCEDFNLCPRFCTLQSNVEVCSHYSIQNCEGVC
EGKESISSYNKKVLAAIASLGEENSTYIIREKGRHFKEEAFVYIKEGRYMGYGFIDTDVS
IATVEDLDPFLRIKEATYHTNKILSSYLRNGAHKNIVILEQPAASSSLKKVSGNWTDGLF
ALQ
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgaaggatcaattatttgcagttgtagatgtagaaaccacgggaggtgggatgagcggg
aacaggcttacagaaatttgcatcgtgctgcttaaggggaataaagtgctggacaagtat
accagtctcataaatcccgaaaagcctatcccttcatatatcactgcacttacaggaatt
gacaatgctcttgttgcaaatgccccaaggtttcatgaagttgcaaaggatattgagcta
atgacccgcgatgcgatcttcgttgctcataatgtcaatttcgattataacgtgctgcgc
aatgagttcagggaactgggatttgaatttacccgcaggaaattgtgtacggttcgcctc
tcgcgtaagctcatcccggggctattctcctatagcctgggacgcctgtgcgattccatc
aatattccaataacttcacggcacagggcagaaggggatacagatgccacagtgatcctg
tttcaaagactgcttggcctggatacgaattttgaagtgatgaggtcgtttttgcatgca
cgatccagagaggctaccttgccgccgcatcttgaagcagaacaaatatttgacttgcca
gatgatcccgggatctatctctttaaggataataagcacaaggtgatctatgcgggaaag
gctataaatattaaaaaaagggtgatttcccatttttacgataaagggacaaaagaatat
aagttggggcaggaaacctatcatattgattatgaaaccacagggaatgaacttatcgcc
cttttgctggaggctgaaaaaattaagaagcattatccaaaatttaatcgtgcccaaaag
cggccgggaacggtttaccagatcattagttacaccaaccaaaagggggttatccagctt
gccctgggaactaccaggaccttaaataattctgtaggtacattttataaccggcttcgt
gctgctgaaaagctggagcagttgtgtgaagattttaatctttgcccccgcttttgtacc
ctgcaaagcaatgtggaggtatgctcccattacagcatacaaaattgtgaaggtgtttgt
gaaggaaaagaatctatatcttcatataataaaaaagtacttgcggccattgcatccctt
ggggaggagaattcaacatatataataagggaaaaaggacggcattttaaggaggaagca
tttgtttatataaaagagggccgttatatgggttacggctttatagatacagatgtatca
attgctactgttgaagaccttgaccctttcctgagaataaaagaagctacctatcataca
aataagatcctgagcagctatttacgcaacggtgcccataagaatatcgtaattctcgaa
caaccggcagccagttcttcccttaaaaaggtttccggtaactggacagatgggttgttt
gccctgcaataa
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