Antarcticibacterium flavum: FHG64_10055
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Entry
FHG64_10055 CDS
T06005
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
afla
Antarcticibacterium flavum
Brite
KEGG Orthology (KO) [BR:
afla00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
FHG64_10055 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
afla03019
]
FHG64_10055 (rnc)
03009 Ribosome biogenesis [BR:
afla03009
]
FHG64_10055 (rnc)
03036 Chromosome and associated proteins [BR:
afla03036
]
FHG64_10055 (rnc)
Enzymes [BR:
afla01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
FHG64_10055 (rnc)
Messenger RNA biogenesis [BR:
afla03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
FHG64_10055 (rnc)
Ribosome biogenesis [BR:
afla03009
]
Eukaryotic type
90S particles
RNase
FHG64_10055 (rnc)
Prokaryotic type
rRNA processing factors
FHG64_10055 (rnc)
Chromosome and associated proteins [BR:
afla03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
FHG64_10055 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
RM44_endonuclase
DSRM_2
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
QCY69712
UniProt:
A0A5B7X4T9
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All DBs
Position
2381615..2382352
Genome browser
AA seq
245 aa
AA seq
DB search
MSVIRKILNSRSSKDGNFFIAMHKILGFKPKDVAHYQKAFTHRSLNQKDKQGNAVNFERL
EFLGDAMLSAVIAGYLFKTVPGGNEGYLTKMRSKVVSRKHLNELGKDLDLIDFVQTNIPK
DQFGANIHGNLFEALIGAIYWDRGYKYCKRFIYERVINPYVDIEQLEGRVISYKSLLIEW
CQKTKKNFNFEIYDDTGNDEVKHFAVKLRIEGRVVAKARATSKKKAEEKASKRAFYALQN
RIEVE
NT seq
738 nt
NT seq
+upstream
nt +downstream
nt
atgagtgttattcgaaaaatattaaattcccgctcttctaaagacgggaatttttttatt
gctatgcataagatccttggatttaaaccaaaggatgttgcgcattatcaaaaagccttt
acgcaccggtcgctcaaccaaaaggataaacaggggaatgcggttaattttgaaagactc
gaattcctgggtgacgccatgcttagtgcagttatagccggctatttgtttaaaacagtt
cccggcggcaatgaaggttatcttaccaagatgcgatccaaggtcgtaagccgtaaacac
ttaaacgagctgggaaaggacctggacctaattgattttgttcaaacaaatattcccaaa
gaccaatttggcgctaatattcatgggaatttatttgaagcccttattggagccatctat
tgggaccgcggatataaatactgcaagcgttttatttatgagagggtcatcaatccatat
gtagatatcgaacagctggagggaagggttataagctacaaaagccttcttattgagtgg
tgtcaaaaaacaaagaagaattttaatttcgagatttatgatgacaccggcaacgatgag
gtgaaacactttgccgtaaaacttagaattgaaggaagggtcgtagccaaggcccgggct
acctctaaaaagaaggcagaggaaaaagcttcaaaaagagctttttatgcccttcaaaat
cgaatagaagtagaataa
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