Aphanizomenon flos-aquae: HEQ12_06400
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Entry
HEQ12_06400 CDS
T07103
Name
(GenBank) ATP-dependent helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aflo
Aphanizomenon flos-aquae
Pathway
aflo03420
Nucleotide excision repair
aflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEQ12_06400
03430 Mismatch repair
HEQ12_06400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aflo03400
]
HEQ12_06400
Enzymes [BR:
aflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEQ12_06400
DNA repair and recombination proteins [BR:
aflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEQ12_06400
MMR (mismatch excision repair)
Other MMR factors
HEQ12_06400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
UvrD_C_2
AAA_19
AAA_12
DUF87
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QSV66621
LinkDB
All DBs
Position
1432372..1434651
Genome browser
AA seq
759 aa
AA seq
DB search
MNNNQLPLNKLRENIALIRAKMRPGQTEMADWHGGPLAVSAVPGAGKSTGMAAAAAIAIA
RQYEYYLNTGNKEYKQLIVVTFTRSATANIKSKIRVKLKELSLPQTGFAVYTLHGLALII
ASRYPHLSGLQLENATLITPNKSHKFIRKAVEQWIINYPETYLSLLTGQQFDGEETEKLR
RQSVLRTEILPDLAHTVIHEAKSSGISPADLLKWSEQTQDKYGILRIAAGLYEQYQKIMQ
LQNFIDYDDMVLGALKVLKNPSTCRIEQNKILAVFEDEAQDSSPLQTDLLEKLASQEFGD
NLDKSALNLIRVGDPNQAINSTFTPADPIYFREFCEDCQSQNRLAEMDQAGRSTQIIIDA
ANFALTWVNNQDFAKIKHRTAPFRTQTIQPVNQENGNPEPVGQGLELHIPRDIYHTVELI
SQRVIELFAENPQSCAAILVRENRQGKWLATALEPILKEHKILVYDVGEKEHRSHIPQEI
LSLLQFCERPHSPDYLKATLDVLVARQLIPTQDINTLASVPEEFLYPSPLTTPQTEIVQK
AAHFCRSLLRAYLELPFYQIISFFALTLKYDQAALATADKLAERVNQQIFGNSSMGAIIS
TLSEIVSSEKFESVEPENVEEQYTKQGQLTIITMHKAKGLDWDYVFLPFLHENLIPGRFW
VPPQGQFLGNFTLPEVARAQIRAGLHKKTIPDINQAWEESKYLKTAEEYRLLYVAMTRAK
KLLWMSADKKAPFIWSKPDNLQISAPCPVFTALKHQFSQ
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
atgaataataaccaattacctctgaacaaattaagagaaaatattgccctcattcgcgcc
aaaatgcgcccaggacaaacagaaatggcagattggcatgggggaccattagctgtatct
gccgtgcctggagcgggaaaatcaacgggaatggcagcagcagcagcgatcgctattgct
cgtcaatatgagtattatttaaacacaggcaataaagaatataaacagttaattgttgtc
acttttacccgttctgcaactgccaatataaaatctaaaattcgagtaaaattaaaagaa
ttatctttaccacaaacgggatttgccgtttataccttgcatggtttagccttaattatt
gccagtcgttatcctcatttatccggtttacagttagaaaatgccacattaatcacacca
aataaaagtcataaattcattcgcaaagccgtagaacaatggataattaattatcctgaa
acttatctaagcttacttactggacagcaatttgatggagaagaaaccgaaaaactccgt
cgtcagtcagtgctacgcacagaaatattaccagatttagctcatacagtaattcatgag
gctaaaagttcaggaatatcgccagcagatttattgaagtggagtgaacaaactcaagat
aaatatggtattttaagaattgcggccggattatatgaacaatatcaaaaaatcatgcaa
ttacagaattttattgattatgatgatatggtattaggggctttaaaagttttaaaaaac
cccagtacctgccgcattgagcaaaacaaaattctggctgtttttgaagatgaagctcaa
gattctagtccattacaaacagatttattagaaaaattagccagtcaagaatttggagat
aatttagataaatcagccttaaatttaattagagttggtgatcctaatcaagccattaat
tccacctttacacctgctgaccctatttattttcgggaattttgcgaagattgtcaaagt
caaaatagactagcggaaatggaccaagctggacgcagtacacaaataattattgatgct
gctaactttgctttaacatgggtaaataatcaggattttgctaaaatcaaacatagaaca
gcaccatttagaacgcagacaattcaaccagttaatcaagaaaatggaaaccctgaacct
gtaggacaaggattagaacttcatattcctagagatatttatcatacagttgaattaatt
tctcaaagagtaattgaattatttgcagaaaatcctcaatcctgtgcagctatattagtt
agagaaaatcgacaaggaaaatggttagctactgctttagaaccaatattgaaagaacat
aaaattctagtttatgacgtgggggaaaaagaacatcgttctcatattcctcaagaaata
ttatcattattacaattttgtgagcgcccccattctcctgattatctcaaagctacttta
gacgttcttgttgcaaggcaattaattcctactcaagatattaataccctagctagtgta
ccggaagaatttttatatcccagtcctttaaccacaccccaaacagaaatagtgcaaaaa
gcggctcatttttgtcggagtttacttagggcttatttagaattaccattttatcaaata
atttcttttttcgccttaaccttaaaatatgatcaagcagcattagcaactgctgataaa
cttgcagaacgggtaaatcagcaaatttttggtaatagttctatgggggcaataatatca
actttaagcgaaattgtcagttctgaaaaatttgaatcagtagaaccagaaaatgtagaa
gaacaatataccaaacaaggacaattaacaattatcactatgcacaaagccaaagggtta
gactgggattatgtatttttaccatttctccatgaaaacctaattcctggaagattttgg
gtccccccccaaggacaatttttaggtaattttaccttaccagaagttgcccgcgcccaa
attcgtgctggacttcacaaaaaaaccatacctgatattaaccaagcttgggaagaatca
aaatatctaaaaaccgctgaagaatatcggttactttatgtcgctatgactagagccaaa
aaacttctatggatgtcagcggataaaaaagcaccctttatctggagtaaaccggataat
ttacaaatctcagccccttgtccagtttttacagctttaaaacatcaattttcccaataa
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