Aphanizomenon flos-aquae: HEQ12_07620
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Entry
HEQ12_07620 CDS
T07103
Name
(GenBank) VacB/RNase II family 3'-5' exoribonuclease
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
aflo
Aphanizomenon flos-aquae
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
aflo03016
]
HEQ12_07620
Enzymes [BR:
aflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
HEQ12_07620
Transfer RNA biogenesis [BR:
aflo03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
HEQ12_07620
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
RNB
HTH_RNase_II
CSD_RNase_II
Motif
Other DBs
NCBI-ProteinID:
QSV66834
LinkDB
All DBs
Position
complement(1705733..1707778)
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AA seq
681 aa
AA seq
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MDKGTLVEFRVQSDRRLGVVDRPDGKARWFIVDERGQSHSLAPRQFTYTVNGQTYKPGEI
AEFLNQVQPYLDPSSLEIAWELLIEDGETVTPSQLASILFSESTPPQCYAAHCLLSEDKL
YFKQKGEAYEPRSAVQVAERKHQISVESQKAKGQQEFLARVEQALQGQVVEWQRMDRQRL
EVLEKYATLLADVIMLKVNYDSLARACPPSAPVLETMNMLGRSATPQGAFQLLIDLGWWS
PHENLFLRRSSISVQFPHQVLEVAQERLDFPPTDLDTNRLDLTHLKVYTIDDESTTEIDD
GLSWEILPDGKERLWVHIADPTRLLIPDDELDLEARKRGSTVYLPTGMIPMFPEVLATGP
MSLVQGKVCCALSFGVVLDEVGSVEDYCIHTGLIKPTYRLTYQDVDEMLELGVQAEPEIE
AIANWAKIRRTWRYGQGAISINMPEAMIKVKDDDINIDVLDDSLSRQLVAEMMILAGEVA
ARYGQTHNIPLPFRGQPQPELPPEEELLLLPAGFVRSCAMRRCMPKSEMSITPVRHAGLG
LDTYTQATSPIRRYSDLLTHFQLKAHLRGEGLPFSAEQLKEVMMTVSSATQEATMVERQT
NRYYALEYLRRHPEEIWQVTVLMWLREDSNLALILLEDLGLQLPMSFRRSVSLGENLLVK
VSLADPQKDMIHFQEIMYQEA
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
gtggataaggggacgttagttgaatttagggttcaaagcgatcgccgtctaggagtggta
gatcgtccagacggtaaagctcgttggttcatagtagacgaaaggggtcaatctcatagt
ctcgcacctcgccaatttacctacacagttaatggacaaacctataaaccgggcgaaatt
gctgagtttttaaatcaagtccagccttatctagacccatcaagtctggaaatagcttgg
gaactactcattgaagatggggaaactgtcacccccagtcaattagcaagtatcctattt
tcagaatccacacctccccagtgttatgcagcccattgtttgttatcagaagataaactc
tatttcaagcaaaaaggggaggcctatgaaccacgcagcgcggtacaagtagcagaacgc
aaacaccagatttcagtagaatcccaaaaagcaaagggacagcaggaatttttagctcgt
gtagaacaggcacttcagggacaagtcgtagaatggcaaagaatggatcgccagcgttta
gaagtattagaaaagtatgcgactttgttagcagatgtgatcatgctcaaggtgaattac
gattctttagctcgtgcttgtccaccttcagccccagtattagaaacaatgaatatgctg
ggacgttctgctacgccccagggtgcttttcaattgttgatagatttgggttggtggagt
ccccacgaaaacctgttcctacgtcgttcgtcaatttccgttcaatttcctcatcaggta
ttagaagtggcgcaagaacgcttggatttccctcccacagatttggacacaaaccgtctc
gatctcacacatctcaaggtatataccattgatgatgaaagcacgacagaaatagatgat
ggtttaagttgggaaatattaccagatggaaaagaacggttatgggtacatatagccgat
cctaccagattattaatcccagatgatgaattagatttggaagccagaaaacggggaagt
acggtgtatttacctacggggatgattcccatgtttccagaggtgttagctacaggtccc
atgagtttggtacaggggaaagtctgttgtgctctgagctttggggtggttttagatgaa
gttgggtctgtagaagattattgtatacatactggtttaattaagcctacctatcgtctc
acctatcaagatgttgatgagatgttagagttgggagtacaagcagaaccagaaattgaa
gcgatcgctaattgggctaaaatacgtagaacctggcgctatggtcaaggggctattagt
attaatatgccagaagcgatgatcaaagtcaaagacgatgatatcaatattgatgtttta
gatgattccttgtcccgacaattagtcgcagaaatgatgatccttgcaggagaggtcgca
gcccgttatggtcaaacccataatatccctcttccctttcgcggtcaacctcaaccggaa
ttacctccagaggaagaactacttctactcccagcgggttttgttcgttcctgtgcaatg
cgtcgctgtatgcctaagagtgaaatgagtattacacctgtgcgtcatgctggattgggt
ttagacacttatacacaagctacttctcctattcgtcgttatagtgacttactcactcac
ttccaattaaaagcacatttacgcggtgaaggtttacctttctctgcggaacaacttaaa
gaagtgatgatgacggttagcagcgctacccaggaagcaacgatggtggaacgacaaact
aatagatattatgctttagaatatttacgtcgtcatcctgaggaaatttggcaggtgaca
gtgttaatgtggttacgagaagatagcaatttagcactaattttattagaagatttgggt
ttacaattacctatgtctttccgacgttctgttagtttgggagaaaatctattagtaaaa
gttagtttagctgaccctcaaaaagatatgattcacttccaagaaattatgtatcaggag
gcttaa
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