Aphanizomenon flos-aquae: HEQ12_10965
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Entry
HEQ12_10965 CDS
T07103
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
aflo
Aphanizomenon flos-aquae
Pathway
aflo03030
DNA replication
aflo03430
Mismatch repair
aflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
HEQ12_10965 (holA)
03430 Mismatch repair
HEQ12_10965 (holA)
03440 Homologous recombination
HEQ12_10965 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aflo03032
]
HEQ12_10965 (holA)
03400 DNA repair and recombination proteins [BR:
aflo03400
]
HEQ12_10965 (holA)
Enzymes [BR:
aflo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
HEQ12_10965 (holA)
DNA replication proteins [BR:
aflo03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
HEQ12_10965 (holA)
DNA repair and recombination proteins [BR:
aflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
HEQ12_10965 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
Motif
Other DBs
NCBI-ProteinID:
QSV67400
LinkDB
All DBs
Position
2427600..2428586
Genome browser
AA seq
328 aa
AA seq
DB search
MPIYVYWGEDDFAMEKAVVILRDRILDPLWTSFNYTSFPADQPDAIIQALNQSMTPPFGA
GGRFVWLINTTLCQNCPDHILAELQRTLKVIPPDSTLLLTSRNKPDERLKSTKLLKQFAT
ISEFSLIPPWKTELLVQSVQQAAQTVGIKISPLVAELLAESVGNDTRLLYNELEKLRLYS
EGSGKPLDVNTVSELVRNTTQNTLQLATAIRTGDTPKALGILNDLTNAAEPGLRIVATLI
GQFRTWLLVKMMVDSGERNPQVIAQGAEISNPKRIYFLQQEVKSLPLQQLISALPLLLEL
EVSLKQGASETSTLQTKIIELCQICRRI
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgccaatctatgtttactggggtgaagatgattttgctatggaaaaagcggtagtaatt
ttgcgtgaccgcattcttgatcccctgtggacaagttttaattatacctcatttcccgca
gatcaaccagatgccatcattcaagctttaaatcagtccatgacaccgccatttggcgct
ggtgggcgttttgtgtggcttatcaacaccactctttgccaaaattgtccagatcatatc
ttagcagaattacaacgcactctcaaagtcatccctccagattctaccttactattgacc
agtcgcaacaaaccagatgaacgcctaaaaagtacaaaactcctaaaacagtttgccaca
atttccgaattttccctaattcccccttggaaaaccgaacttttagtccagtcagttcaa
caagcggctcaaactgtagggataaaaataagtcctttggtagccgaactcctagccgaa
tccgtaggtaatgatacccgtcttctctacaatgaactagagaaattacgtctctatagc
gaaggtagcggtaaaccattagatgtgaatacagtatctgaattagttagaaatactact
caaaataccttacaattagcaacagccatcagaaccggagataccccgaaagctttaggg
atactaaatgatctcaccaatgcagccgaaccaggtttacggatagttgccacactcatt
ggtcaatttcgcacctggttattagtaaaaatgatggtggacagcggtgaacgcaacccg
caagtcatcgctcaaggggctgaaatctctaaccccaagcgtatctacttcctacagcaa
gaagttaagtctctccccctacagcaacttatctctgcattacccctgctattagagtta
gaagttagcctcaagcaaggtgcatctgaaacttcaacactacaaactaaaatcatcgaa
ctttgtcagatatgtcgccgtatttaa
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