Aphanizomenon flos-aquae: HEQ12_11850
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Entry
HEQ12_11850 CDS
T07103
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
aflo
Aphanizomenon flos-aquae
Pathway
aflo03410
Base excision repair
aflo03430
Mismatch repair
aflo03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEQ12_11850 (recJ)
03430 Mismatch repair
HEQ12_11850 (recJ)
03440 Homologous recombination
HEQ12_11850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aflo03400
]
HEQ12_11850 (recJ)
DNA repair and recombination proteins [BR:
aflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
HEQ12_11850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
HEQ12_11850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
HEQ12_11850 (recJ)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DHH
DHHA1
RecJ_OB
Motif
Other DBs
NCBI-ProteinID:
QSV67546
LinkDB
All DBs
Position
2608718..2611030
Genome browser
AA seq
770 aa
AA seq
DB search
MEWILTTTEKPPDWFIELVKKYAPATSGNFASQLFWQRGIQNEEKLAAFINYQIYQPANP
GEFGQEMNLAVQRLITARKTGEKVAIWGDFDADGITSTAVLWDGLGEFFQQHHQLSYYIP
NRLTESHGLNKPGIDILAAQDCKLIITCDTGSTNISEIIYAQNLGIDVIITDHHTLPSAR
PPVIAIINPRYLAKEHPLYHLSGVAVAYKLVEALYISLPDIPKHPLTDLLDLVAVGLIAD
LVQLSGDCRYLAQLGIQQLHTDYKKLPKERRRPGLGKLLELCQKSGDRPTDISFGLGPRI
NAVSRIHGDASFCVELLTSRDMQRCQLLAEETELANSRRKSLQKDVQAQVTKKLRQLDLS
TTSIIVLEDPQWAVGVLGLVAGQIAQETGRPTILLSTEAKENQTDSSPCLARGSARSINS
VDLYQLVQEQAHLLYRFGGHPFAAGLSLLIENIPLFTAAINQKLRQSLGGINLIPSVQAD
LVVTVADLGKDLFLELKLLEPCGMGNPIPKLLIKNCWFENSRHQNQQDWKGNKIQYIKTD
FNIRDNSNNNPFPGIWWGHYQEELPIGRCDCIAEIDFNSFKKRYEIRLIAVRSHVETEIK
TPNLAMILDWRNQENLGEIKSEKSLLIIKDCPTSWDNLRLWWKQSLEQQKQLVIAWKKSQ
NHTPKDIWITLVGIAKYLSRTNQPVISVELLEKLGISNQCLYLGFQALKYLGFIIQRQDH
HLQIIWDSRYDQKSADKVINQFLAAVREEQFQRDYFSHVPLSIIIAMMNK
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atggaatggattttaacaacaacagaaaaacccccagattggtttatcgaattagtaaaa
aagtacgcacccgcaacaagtggtaattttgcatctcaattattttggcaacggggaatt
caaaatgaggaaaaattagcagcttttattaattatcaaatttatcaacctgcgaatcct
ggagaatttggacaggaaatgaatttggctgtgcaacggttaataactgcgagaaaaacg
ggagaaaaagttgctatttggggagattttgatgcagatggtattacctcaactgcggta
ttatgggatggtttgggagaattttttcagcagcatcaccaattaagttattatattccc
aatcgcttaacagaatctcatggtttaaataaaccaggaattgatattttagctgcccaa
gattgtaaattaattattacctgtgatacaggcagtacaaatatttcagaaatcatttat
gcccaaaatttaggaatagatgtcatcataactgaccatcatacattaccatcagcacgt
cctccggtaattgcaattattaacccgcgttatttagcaaaagaacaccctttatatcat
ctttctggtgtggcagttgcttataaattagtggaagcattatatataagtttgccagat
attcccaaacatccattaacagatttattagatttagtagcggtgggattaattgctgat
ttggtacaattaagtggtgattgtcggtatttggcacagttgggaattcaacaattacac
acagattataaaaaattacccaaagaaagaagaaggccaggtctgggtaagttattagaa
ttatgccagaaaagtggcgatcgccctacagatatttcctttggtttgggaccccgcatt
aatgccgtgagtcgcattcatggtgacgctagtttttgtgtagaattattgacgagtaga
gatatgcagcgttgtcaactacttgcagaagaaacagaattagctaattcccgtcggaag
tctttacaaaaagatgtgcaagcgcaagttactaaaaaactcaggcaattagacttatca
actaccagtatcattgttttagaagatcctcaatgggcggttggtgttttgggtctagtt
gccggacaaattgcccaggaaacagggcgaccgacaattttgttaagtacagaagcaaag
gaaaatcagacagattctagcccatgtctagcgcgaggttcagcccggtcgattaattct
gttgatttatatcaactagttcaagaacaagcccatttattataccgttttggtggacat
ccctttgcagcaggtttgagtttattaatagaaaatatccctttatttacagccgcaatt
aaccagaaattacgccaatctttaggaggaattaatctcattcccagtgtacaagctgat
ttggtggtgacggttgcagatttgggcaaagatttatttttagaattaaaacttttagaa
ccctgtggaatgggaaatcctattcccaaattactaattaaaaattgttggtttgaaaat
tctcgtcatcaaaatcaacaggattggaaaggaaataaaatccaatatattaaaactgat
tttaatatccgagataactctaataataatccttttccggggatttggtggggacattat
caggaagaattacctataggtagatgtgattgtattgccgaaattgattttaacagtttt
aaaaaacgttatgaaattagattaattgcggtacgttctcatgtggaaactgaaataaaa
actccgaatttggcaatgattttagattggagaaatcaggaaaatttaggagaaataaaa
tctgaaaaatcattattaatcattaaagattgtcctaccagttgggataatttacgtttg
tggtggaagcaatctcttgaacaacaaaaacaattagtaattgcttggaaaaaatcccaa
aaccacacccctaaagatatttggataaccttagtaggtattgctaaatatctcagtcga
acaaatcaaccagttatctctgtagaacttttagagaaattaggtattagtaatcaatgt
ctatatttgggttttcaagcattaaaatatttagggtttattattcaacgtcaagatcat
catttacaaattatctgggattctagatatgatcaaaaatctgctgataaggttatcaac
caatttttagccgcagtcagagaagaacaatttcaacgagattatttttctcatgtgcct
ttatctattatcattgctatgatgaataaataa
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