Aphanizomenon flos-aquae: HEQ12_13060
Help
Entry
HEQ12_13060 CDS
T07103
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
aflo
Aphanizomenon flos-aquae
Pathway
aflo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
HEQ12_13060
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflo03019
]
HEQ12_13060
03400 DNA repair and recombination proteins [BR:
aflo03400
]
HEQ12_13060
Enzymes [BR:
aflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEQ12_13060
Messenger RNA biogenesis [BR:
aflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
HEQ12_13060
DNA repair and recombination proteins [BR:
aflo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
HEQ12_13060
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
RecQ_Zn_bind
ResIII
FAD_binding_1
Motif
Other DBs
NCBI-ProteinID:
QSV67753
LinkDB
All DBs
Position
2883915..2885360
Genome browser
AA seq
481 aa
AA seq
DB search
MNLPLTQSDHDVRAALKTIWGYDDFRPPQKEIVNSLILQKDALIIMPTGGGKSICFQLPA
LLKTGLTLVISPLVALMENQVEELRQKQQKAGLLHSELPALQRQKTLQALEKKELRLLYL
SPETLLSPIVWQKLSNPQLQINGLILDEAHCLVQWGDTFRPAYRRLGTVREALLKSKPPG
TKISIAAFTATADPLAQKIISQVLKLDKPDIFKINPYRQNLNPIVRIAWTPKGRKQQLLN
FIQKRPKQVGLIYVRTRKDSEYLSQWLIENGYQTASYHAGLSPAERRNIEANWLGGKILF
VVCTCAFGMGINKSDVRWVVHFHAPHLLSEYVQEIGRAGRDGKPADVLTLVSEPTGFLDS
GDKQRQKFFEQQLQLQQQKARKLVKKLPPQGEINSVIKQFPDSAVALSLLHSNGQLEWLD
PFHYSISSQSVNSSKTQLQVGKQMTAYLTIKQCRWRFLLNAFGFETPTVNWRCGHCDNCK
N
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttcctttaacacaatctgatcatgatgttcgcgcagcattaaaaacaatttgg
ggatatgatgattttcgtcctccccaaaaggaaattgttaacagtttaatcttacaaaaa
gatgctttaattattatgcctacaggagggggaaaatctatttgttttcaacttcccgca
ctactaaaaacgggattaactttagtaatttcccctttggtggcgctaatggaaaaccaa
gttgaggaattacgtcaaaaacagcaaaaagcaggacttttacacagtgaattacccgca
ttacaacgacagaaaactttacaagctttagaaaaaaaggaattaagattattatattta
tctcctgaaaccttactgagtccaatagtttggcaaaaattgtctaatcctcaactacaa
attaatggtttaatcctagatgaagcccattgtttagtccaatggggtgatacttttcgt
ccagcttaccgacgcttgggaactgtgcgggaagcgttgttaaaatcaaaaccaccagga
acaaaaattagtatagcagcttttacggccactgctgaccctttagctcaaaagattatt
tctcaagttttaaaattagacaaacctgatatttttaagattaatccctaccgacaaaat
ttaaatcctattgtccgaattgcttggactcctaaagggagaaaacaacaattattaaat
tttattcaaaaaagaccaaagcaagttggtttaatttatgtaagaactcgaaaagatagc
gaatatctcagtcaatggttaatagaaaatggctatcaaacagctagttatcatgcgggg
ttgagtccagcagaacgtcggaatattgaagctaattggttaggtggaaaaatcctgttt
gtcgtctgtacttgtgcttttggtatggggataaataaatctgatgtccgttgggtagtt
cattttcacgcaccacatttattatctgaatatgtacaagaaatagggagagcaggaaga
gacgggaaacctgctgatgttttaaccttggtcagtgaaccgacaggatttttagattct
ggggataaacaaagacagaaattttttgaacaacaactacaattacaacaacaaaaagcg
cgaaaattagttaagaagttaccaccccaaggggaaataaatagtgtaattaaacaattt
ccagatagtgcggtggcgctttctcttctccatagtaacggacaattggaatggcttgat
ccttttcattattctatttcttctcagtcagtaaattcgtcaaaaacccaattacaagtc
ggtaaacaaatgactgcatatctaacgattaaacagtgtcgttggcggtttttattaaat
gcttttggctttgaaacaccaactgttaattggcgttgtggacattgtgataattgtaaa
aattaa
DBGET
integrated database retrieval system
