Aphanizomenon flos-aquae: HEQ12_13805
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Entry
HEQ12_13805 CDS
T07103
Symbol
pcrA
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
aflo
Aphanizomenon flos-aquae
Pathway
aflo03420
Nucleotide excision repair
aflo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
HEQ12_13805 (pcrA)
03430 Mismatch repair
HEQ12_13805 (pcrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aflo03400
]
HEQ12_13805 (pcrA)
Enzymes [BR:
aflo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HEQ12_13805 (pcrA)
DNA repair and recombination proteins [BR:
aflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
HEQ12_13805 (pcrA)
MMR (mismatch excision repair)
Other MMR factors
HEQ12_13805 (pcrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
DEAD
Viral_helicase1
AAA_30
AAA_12
ResIII
DUF3553
SinI
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
QSV67884
LinkDB
All DBs
Position
complement(3030372..3032699)
Genome browser
AA seq
775 aa
AA seq
DB search
MTTNIDFLSHLNPNQRQAVEHYCGPLLVVAGAGSGKTRALTYRIANLIIKHRVNPENILA
VTFTNKAAREMKERIQRIFAEQLAISQHGKKFDLLTEYEQSLIKSQVYRTTIKDMWCGTF
HSLFSRILRFDIEKYQDEKGRKWNKNFSIFDESDVQSVIKEIVTKDLNLDGKKFEPKSIR
YAISNAKNQGLSPQEFENEQPNYRGRVIADVYNRYQDKLAQNNALDFDDLILIPTRLFQQ
NEQVLSYWYRKFCHVLVDEYQDTNRTQYTLIQLLVTNGENRKRELTWQNRSVFVVGDADQ
SIYSFRMADFTILLEFQEDFGDGLADDDTRSMVKLEENYRSCENILQAANELIENNTQRI
DKILKATREPGEEIYCHKADEEMAEAAFVINQIRNLEHQNPELNWGNFAILYRTNAQSRP
FEELLVKYQIPYTVVGGMKFYDRKEIKDAVAYLRVINNPADTVSLLRVINTPRRGIGKAT
IDALVNASQQLGTTLWEILSDETSVNTLAGRSSKAVNNFAAMIQNRQEQIKIVPGSEILQ
GILEDSGYIKELQDQTTDEADNRISNVNELYNAMLQFQEENAGEDISLEAFLQSAALSSD
LDNLKEGQTAVSLMTLHASKGLEFPVVFLVGLEQGLFPGYRSLQDPLLLEEERRLCYVGI
TRAKERLFLSHARERRLYGSREPAMRSQFLDELPAELINTQNKVTRSFTKTNSENSSKQG
TTGNWQVGDRVLHKSFGIGEITHVFGEGNKISVAIKFVSLGQKIIDPRVAQLQKV
NT seq
2328 nt
NT seq
+upstream
nt +downstream
nt
atgaccacaaatattgattttcttagtcatcttaaccctaatcaacgtcaagcggtggaa
cactactgtggaccattgttagtggtagctggtgctggttcaggaaaaacccgggcactt
acctaccgtattgctaatttaattataaaacatcgtgttaatcctgaaaatatcctcgcg
gtgacatttactaataaagctgctagggaaatgaaggaaagaattcaaagaatatttgct
gaacaattagcaatttcgcaacatggtaaaaagtttgatttgctaacagaatatgaacaa
agtttaattaaatcacaggtttaccgcacaactatcaaagatatgtggtgtggaactttt
cacagtttattttctcggattctgcggtttgatatcgaaaaatatcaagatgaaaaaggc
agaaaatggaataaaaacttttctatttttgatgaatcagatgtccaaagtgtaattaaa
gaaattgtcaccaaagatctaaatttagatggtaaaaaatttgaaccaaagtctattcgc
tacgctattagtaatgccaaaaatcaaggactttctccccaagaatttgaaaatgaacaa
ccaaattatcgcggtagggtaattgctgatgtttataatcgctatcaggataaactggct
caaaataatgctttagattttgatgatttaattttaattcctactagattatttcaacaa
aatgaacaggttttgagttattggtatcgcaaattctgtcatgttctagttgatgaatat
caagatacaaaccgcactcaatatactttaattcagcttttggtgactaatggggaaaat
cgtaaacgtgaattaacatggcaaaatcggtctgtgtttgttgtcggtgatgctgaccag
tcaatttacagttttagaatggcagattttaccattttactggaatttcaagaagatttt
ggtgatggtttggcagatgatgatacccgttcaatggtaaagttagaagaaaattatcgc
tcatgtgaaaatattcttcaagctgctaatgaattaattgaaaataacactcaacgcatt
gataaaattcttaaggccacaagagaaccaggggaggaaatttattgtcataaagctgac
gaagaaatggccgaagcggcttttgtcattaatcaaattcgcaatttagaacatcaaaac
ccggaattaaattggggtaactttgctattttatatcgaactaatgcccaatctcgacct
tttgaggaattattagttaaatatcaaattccttatacagttgtgggaggaatgaagttt
tatgatcgcaaagaaattaaagatgctgttgcatatttaagagtgattaataatccagcg
gatactgtaagtctattacgagttattaacacgcctagacgaggaatcggtaaagcgact
attgatgctttagtgaacgcttcccagcaattaggaacaactttatgggaaatattaagt
gatgaaacctctgtaaatactttagcaggacgttcttcaaaagcggtaaataattttgct
gcaatgattcaaaatcgtcaagaacaaatcaaaatagtccctggttcggagatattacaa
ggcattttagaagattcgggttatattaaagaattgcaagatcaaactacagatgaagct
gataacagaattagcaacgttaatgagttgtataatgctatgctgcaattccaagaggaa
aatgccggagaagatatttctttagaagcatttttacaaagtgcagcgcttagttctgat
ttagataatttaaaagaaggacaaacagcagtttctttaatgaccttacacgcttctaag
ggtttggaatttcctgtggtatttttagtaggattagagcagggactttttccaggttat
cgttctttacaagatcctttattgttagaagaagaacggcgtttgtgctatgttggcatt
acccgcgctaaagaaagattgtttttatcccatgcaagagaaagacgtttatatgggtcc
agagaaccggcaatgcgatcgcaatttctcgatgaattgccagcggaattaataaataca
caaaataaagttacccgtagttttactaaaacaaattcggaaaactcaagtaaacaagga
actacagggaattggcaggtaggtgatagagtattacataagtcattcggtattggtgaa
attactcatgtttttggagaaggaaataagatttctgtagcgattaaatttgttagttta
ggacagaaaattatagaccccagagtagcacaattacaaaaagtctaa
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