Aphanizomenon flos-aquae: HEQ12_14440
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Entry
HEQ12_14440 CDS
T07103
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
aflo
Aphanizomenon flos-aquae
Pathway
aflo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
HEQ12_14440
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aflo03400
]
HEQ12_14440
Enzymes [BR:
aflo01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
HEQ12_14440
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
HEQ12_14440
DNA repair and recombination proteins [BR:
aflo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
HEQ12_14440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
QSV67995
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All DBs
Position
3174194..3175033
Genome browser
AA seq
279 aa
AA seq
DB search
MPELPEVETVRRGLNQLTLSQEVTGGDILLQRTISYPFSVDEFVDRIKGNTIATWHRRGK
YLLAELSTPSPSYLGVHLRMTGQLLWLNQDEPLHKHTRVRLFFGEKQELRFVDQRTFGKI
WYVPVNMPVEAIITGLAKLAVDPFSPEFTVEYFANKLKKSRRPIKTGLLDQSVVAGLGNI
YADEALFKSRILPTTPCTELQISQIELLRIAIIEVLSASIALGGTTFSNFLSVKGVNGNY
GGEAWVYNRTGEPCKVCGHVIQRLKLGGRSSHFCSQCQS
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgcctgaagttgaaacagtccgccggggtttaaatcaattaaccctgagt
caagaagtcacggggggagatatcttgctacaacgcaccatctcctacccgttttctgtt
gatgaatttgttgatagaattaaaggaaataccattgctacctggcatcgtcgtggtaag
tatctcctcgctgaactttctaccccttccccaagttatttaggggttcacctccgcatg
actggtcaattactttggttaaaccaagatgaacctttacacaaacacaccagagttagg
ttattttttggagaaaagcaagaattacgctttgttgaccagcgtacctttggaaaaatc
tggtatgttcctgttaatatgcctgtagaagctattattacaggtttggcaaaattggca
gttgaccctttttccccagagtttactgtggagtattttgccaataaattaaaaaaatcc
cgtcgtccaattaaaactggattattagatcagtcggtggtggcaggattaggtaatatt
tatgcagatgaggctttgtttaaaagtcggattttaccgactaccccctgtacagagttg
caaatctcacaaattgaacttttgcgaattgccattattgaagttttatccgctagtatt
gccctaggtggtacgacttttagtaatttcttgagtgttaaaggtgttaacggtaattat
ggcggtgaagcgtgggtttataatcggactggagaaccttgtaaagtttgtggtcatgtt
atccaacgcctgaagttaggtgggcgttctagtcatttttgttctcagtgtcaaagttag
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