Aphanizomenon flos-aquae: HEQ12_19195
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Entry
HEQ12_19195 CDS
T07103
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
aflo
Aphanizomenon flos-aquae
Brite
KEGG Orthology (KO) [BR:
aflo00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
HEQ12_19195 (rnc)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflo03019
]
HEQ12_19195 (rnc)
03009 Ribosome biogenesis [BR:
aflo03009
]
HEQ12_19195 (rnc)
03036 Chromosome and associated proteins [BR:
aflo03036
]
HEQ12_19195 (rnc)
Enzymes [BR:
aflo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
HEQ12_19195 (rnc)
Messenger RNA biogenesis [BR:
aflo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
HEQ12_19195 (rnc)
Ribosome biogenesis [BR:
aflo03009
]
Eukaryotic type
90S particles
RNase
HEQ12_19195 (rnc)
Prokaryotic type
rRNA processing factors
HEQ12_19195 (rnc)
Chromosome and associated proteins [BR:
aflo03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
HEQ12_19195 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonuclease_3
Ribonucleas_3_3
dsrm
RM44_endonuclase
DSRM_2
Motif
Other DBs
NCBI-ProteinID:
QSV68809
LinkDB
All DBs
Position
4254503..4255225
Genome browser
AA seq
240 aa
AA seq
DB search
MSSVYPRRQRQLESLVQKFGLSLNSPIKWQLLDLALTHPTVSDTANYEQLEFVGDAVVRL
VAAVVLWEHYPDCSVGDFAAIRSVLVSDRILAQLAREYGLELYLLVAGSATADHIGQESR
LADSFEAVLGALYLSTQNLNLIRPWLDSHFQQLTTEIRLDPAMLNYKAALQEWTQAQFKV
LPEYRVLEISQPHRTHERFFAEVWLHEKMLGQGKGRSIKAAEQAAAKEAYLLINAQVTDE
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgtccagcgtttatccccgaagacaacggcagcttgaaagtttagttcaaaagtttggt
ttgtcactaaattcaccaataaagtggcaattattggacttggctctaactcatcctacc
gtctccgataccgccaattatgaacaactagaatttgtcggcgatgcggtggtacgtctc
gtggcggctgtggtattatgggaacattaccctgattgctccgttggtgattttgccgct
attcgttccgttttagtgagcgatcgcattctcgcccaattagcaagagaatatggttta
gaattatatttattggtggctggtagtgctactgctgaccatatcggccaagaatcacga
ttagcagattcttttgaagcagttctaggagcgctttacctgagcactcaaaatcttaac
ctgattcgtccttggttagattcccatttccaacagctaaccacagaaatccgtcttgac
cctgctatgcttaattataaagcagctttacaagaatggactcaagcacaattcaaggtt
cttccagaatatcgagttttagaaatcagtcaaccccaccgcactcatgagcgcttcttt
gctgaagtttggttacatgaaaaaatgctaggacaaggtaaaggccgttctattaaagcc
gcagaacaagccgctgcaaaggaggcttatttgctaattaacgctcaagtcacagatgaa
taa
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