Apis florea (little honeybee): 100862976
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Entry
100862976 CDS
T09140
Name
(RefSeq) uncharacterized protein LOC100862976
KO
K15542
polyadenylation factor subunit 2
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100862976
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100862976
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
100862976
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Beta-prop_WDR3_1st
Beta-prop_THOC3
Beta-prop_WDR5
WD40
WD40_CDC20-Fz
WD40_Prp19
Beta-prop_EML_2
WD40_WDHD1_1st
Beta-prop_EML
WDR55
Beta-prop_WDR3_2nd
Beta-prop_CAF1B_HIR1
WD40_Gbeta
Beta-prop_IFT140_1st
EIF3I
Beta-prop_WDR36-Utp21_2nd
ANAPC4_WD40
Beta-prop_WDR36-Utp21_1st
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_RIG_2nd
Beta-prop_Aladin
Beta-prop_WDR19_1st
Beta-prop_EIPR1
WD40_MABP1-WDR62_1st
WD40_RFWD3
eIF2A
WDR90_beta-prop_4th
Beta-prop_WDR35_TULP_N
Beta-prop_IFT122_1st
Beta-prop_WDR75_1st
Beta-prop_Vps41
Beta-prop_HPS5
Beta-prop_SCAP
Beta-prop_DCAF4
PEP5_VPS11_N
Beta-prop_WDR41
Beta-prop_WDR11_2nd
WD_LRWD1
Beta-prop_SPT8
Beta-prop_ACSF4
WDR54
Motif
Other DBs
NCBI-GeneID:
100862976
NCBI-ProteinID:
XP_003691567
LinkDB
All DBs
Position
Unknown
AA seq
1055 aa
AA seq
DB search
MSANTQFANPPPAISLPNMSVPPPATPNLSAPPPNLTTINTSGSYQHRYTNHRDGARGFF
KPFRPYHAPKIVAAGQDTLQDEFDGKRLRKSVMRKTVDYNSAIIKSLENRVWQRDYRDRR
ALQPDVMYYPDLLPPPSYVDNPINAVTTRFVKTATNKMRCPIFCMAWTPEGRRLVTGASS
GEFTLWNGLTFNFETILQAHDSPVRTMVWSHNESWMVTGDHAGYVKYWQSNMNNVKMFQA
HKEAIRGLSFSPTDHKLATCSDDGTVRIWDFLRCHEERILRGHGADVKCVHWHPQKSLVI
SGSKDNQQPVKLWDPKTGQSLATLHAHKSTVMDVKWNENGNWLVTASRDHLLKLFDLRNL
SQEVQTFRGHKKEASSVAWHPSHEGLFCSGGSDGAILFWHVGADKEVGAIEQAHDSIVWT
LAWHPLGHILCSGSNDHTSKFWTRNRPGDLMRDKYNLNTLPAGSAGVDDHEIADEAAVIP
GMGPEDRINADGEPEDKSGGIPGLDLDHAVDEGKKFANKKVPYSKPIPRNFQAQWNEMEA
EDMEQVEALNAFVNQLIETTPGAVPLNEVTPNGIILYGKMIPVEPGSKLAEAISKGNDAI
NKLVFSGEIEELRDVVGPPDNMDDSEEYLQDDDEIDYSKVPDIELPPPLPSSKFAQNPEL
LKALNRGGKRKFDQLIGWSDGGASDRTSKIHQPVFGGVMTEDSQSSDTDLRYTGAKSNQH
SNETNSFHSGQDEDLRKLPHGESTRNTNRDEDLRFNISSGPGRPSSRSDYDVRSNFADKD
FRSSHGFSLKKPLDNDIYDDRDRDGSSRWDDEKSMNDGPRKGDGGFSSNFDKRDNMPIGI
GISNNMPHLGNSISHISSHHNMQNINPNMTPPIPSLVPHPNMSQHPMQNKPLHPGMQGID
GPMHMMHHPNMHPGFGPNGPPPGNFGPNFRPPNGNFGPNQHFRPSPLPPFGPNQGPFGNN
FQGLPNFRGPNSGPPNFDRPGFGPGFRGQNPGQNPANNFNSNFGNFGNKLGPNRGPMNRG
PNDNNMGRMGRSGYNNRGRGRDGDQPRGIRGRDNY
NT seq
3168 nt
NT seq
+upstream
nt +downstream
nt
atgtctgcaaatactcaatttgcaaatcctccaccagctataagtttacctaatatgtct
gtgccacctcctgctactccaaatttatcagctccacctcctaatttaactactataaac
acatctggaagttaccagcatcgatataccaatcatagggatggagcaagaggatttttt
aaaccatttagaccttatcatgcacccaaaattgttgctgctggtcaagatacattacaa
gatgaatttgatggaaaaagacttcggaaatctgttatgcgcaaaactgtagactacaat
tctgctattataaagagcttagagaatcgagtatggcaaagagattatagggacaggcgt
gcccttcaaccagatgtaatgtattatcctgatctacttccaccacctagttatgttgat
aatcccataaatgcagttactacaagatttgtaaaaactgcaacaaataaaatgcgatgt
cctatcttttgtatggcttggacaccagagggaagacgtcttgttactggtgcatctagt
ggagaatttactttatggaatggtcttacgtttaattttgaaactattttgcaggcacat
gatagtcctgtgagaacaatggtttggtcacacaatgagagctggatggtcacaggagat
catgcaggctatgtgaagtattggcagagcaacatgaacaacgtcaagatgtttcaggcg
cacaaagaagcgattagaggactcagtttcagcccaacggatcacaaactggcaacatgc
agtgatgatggaactgtcagaatttgggactttcttcgatgtcatgaagaacgaattctc
aggggtcatggagctgatgtgaagtgtgtacactggcatccacaaaaaagtctagtcatc
tctgggagcaaagataatcagcaaccagttaaattatgggacccaaaaactggacagtct
cttgcaactttgcatgcacacaaatcgacagttatggatgttaaatggaatgaaaatgga
aattggctagtaactgcgtcacgagatcatttgctcaaattgtttgatcttcgaaattta
agtcaagaagttcaaacgtttcgtggtcataaaaaagaagcttctagcgttgcgtggcat
ccaagtcacgaaggtctcttttgtagtggcggtagtgatggagctattttattttggcat
gtcggagctgataaagaagtaggtgcgatagaacaagctcatgatagtatagtctggaca
ttagcatggcatccattaggacatattctatgctccggtagtaacgatcatacttcaaag
ttttggacacgaaacagacctggagatttaatgagagacaagtataatctcaatacttta
cctgcaggatcggctggtgttgatgatcacgaaattgccgatgaagcagccgtcatacct
ggtatgggaccagaagatagaatcaatgctgatggtgaaccagaagacaaaagtggtggt
attcctggtttagatttggatcatgcagttgatgaaggcaagaaattcgctaataaaaaa
gttccatatagcaaaccaattccaagaaattttcaagctcaatggaatgaaatggaagca
gaagatatggagcaggtagaagctttaaatgcatttgtaaatcaattaattgaaaccacg
ccaggagcagtgcctctaaacgaagtgacaccaaatggtattatattatatggaaaaatg
attcccgttgaacctggttctaagttagcagaagcaattagtaaaggaaacgatgccata
aataaattagtattctccggagaaatagaagaactacgggatgttgtaggtccaccggat
aacatggacgattccgaagaatatttgcaagacgacgacgaaatagattattctaaagta
cccgatattgaacttcctccacctttacctagttccaagttcgcacagaatcccgaattg
ttaaaagctttgaatcgtggtggaaagcgaaagtttgatcaactgatcggttggagtgat
ggtggagccagtgatcgaacatcgaagattcatcaaccggttttcggcggagtgatgaca
gaagactcacaatctagtgataccgatttaaggtataccggagctaagtcaaatcaacac
tccaacgagaccaactcttttcatagtggacaggatgaagatctcaggaaacttcctcat
ggtgaaagcactagaaatacaaatcgcgacgaggacttacggtttaacatatccagcgga
cctggaaggcctagttcgcgttctgattatgatgtaaggagtaactttgcagataaggat
tttaggagttcacatggattttctttaaagaagcctttggacaacgacatttatgatgat
agagatagagatggtagttcgcgatgggatgatgaaaagtcaatgaatgatgggcccagg
aaaggagatggtggtttttcaagcaatttcgataaacgcgataatatgcccataggtata
ggcataagtaacaatatgccccatttaggcaacagtatatctcatatatcgagtcatcat
aatatgcagaatattaatcctaatatgactcctcccattccaagtttagtgccacatcca
aacatgtcccagcatcctatgcagaataaaccactacatcctggtatgcaaggaattgat
ggtcccatgcacatgatgcatcatcctaatatgcatcctggttttggtcctaatggacca
ccacctggaaatttcggtcctaattttagaccgccaaatggtaatttcggacctaatcaa
cactttaggccgagtccattacctccatttggaccgaatcaaggaccattcggtaacaat
tttcaaggtttgccaaattttcgtggaccgaattctggtccgcccaattttgatcgacct
ggattcggtcctggttttcgaggtcaaaaccctggacaaaatccagcaaataattttaat
tcaaatttcggtaactttggaaataaacttggacctaatcggggtcccatgaatcgggga
cctaatgacaataacatgggaagaatgggaaggagtgggtataataatcgcggtagagga
cgcgatggtgatcaaccacgaggcattcgaggaagagataattattga
DBGET
integrated database retrieval system
