Apis florea (little honeybee): 100863123
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Entry
100863123 CDS
T09140
Name
(RefSeq) ATP-dependent RNA helicase WM6
KO
K12812
ATP-dependent RNA helicase UAP56/SUB2 [EC:
5.6.2.7
]
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03013
Nucleocytoplasmic transport
aflr03015
mRNA surveillance pathway
aflr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100863123
09122 Translation
03013 Nucleocytoplasmic transport
100863123
03015 mRNA surveillance pathway
100863123
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100863123
03041 Spliceosome [BR:
aflr03041
]
100863123
Enzymes [BR:
aflr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100863123
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100863123
Spliceosome [BR:
aflr03041
]
Complex C
Other components
EJC/TREX
100863123
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
100863123
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
100863123
NCBI-ProteinID:
XP_003697706
LinkDB
All DBs
Position
Unknown
AA seq
424 aa
AA seq
DB search
MADNDDLLDYEDEEQTEQLVDGSRDTPAKKEVKGTYVSIHSSGFRDFLLKPEILRAIIDC
GFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLELTENQVYVLVMCHTR
ELAFQISKEYERFSKYMPHVKVGVFFGGLPIQKDEEVLKNTCPHIVVGTPGRILALVRNK
KLNLKHLKHFILDECDKMLELLDMRRDVQEIFRSTPHGKQVMMFSATLSKEIRPVCKKFM
QDPMEVYVDDEAKLTLHGLQQHYVKLKENEKNKKLFELLDVLEFNQVVIFVKSVQRCMAL
AQLLTEQNFPAIGIHRGMTQEERLSRYQQFKDFQKRILVATNLFGRGMDIERVNIVFNYD
MPEDSDTYLHRVARAGRFGTKGLAITLVSDESDAKILNDVQERFDVNITELPDEIDLASY
IEGR
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atggcagataacgatgatcttttggattatgaggatgaagaacagactgaacaattagtt
gatggaagcagggatacacctgctaaaaaagaagttaaaggcacatatgtatccattcat
agtagtggatttagagattttcttcttaaacctgaaatattacgcgcaattattgattgt
ggttttgaacatccatctgaagttcaacatgaatgtattcctcaagcagttcttggcatg
gatatattatgtcaagcaaaatctggtatgggaaaaactgctgtatttgtactagcaaca
ttacagcaattagaattaactgaaaaccaagtttatgttcttgtcatgtgccacacacga
gaacttgcttttcaaataagcaaagaatatgaaagatttagtaaatatatgcctcatgta
aaggttggagtattttttggtggtttgccaattcagaaagatgaagaagtcctgaagaat
acatgtcctcacattgttgttggtactccaggtcgcatccttgctcttgttcgaaataaa
aaattaaatttgaaacatttgaagcactttattctcgatgaatgtgacaaaatgctcgaa
ttattagacatgcgtagggacgtacaggaaatatttagaagcactccacacggcaaacaa
gtcatgatgttcagcgctacattgtccaaggagatacgtcctgtctgcaaaaaattcatg
caagatcccatggaagtctatgtggatgatgaagcgaaactcacgttgcatggtctacaa
caacattatgtgaaacttaaagaaaatgaaaagaataagaagctatttgaattacttgat
gtacttgaatttaatcaggttgttatctttgtaaaatctgtacaaaggtgcatggccttg
gcacaattattaacagaacaaaattttcctgcaattggtatacatagaggtatgactcaa
gaagaacggttatcaaggtatcagcaatttaaagatttccaaaaacgaattcttgtagct
acaaatttatttggacgtggtatggatattgagcgtgtaaacatagtatttaattatgat
atgccagaagattcagacacatacttacatcgagtagctagagccggtcgttttggtacc
aagggtcttgctattacattagtaagtgatgaaagtgatgctaagatattaaatgatgtt
caagaacgatttgatgttaacattacggaattaccagatgaaatagatttagcttcatat
attgaaggacgataa
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