KEGG T09140: 100864211

Apis florea (little honeybee): 100864211

Entry

100864211         CDS       T09140

Name

(RefSeq) cleavage and polyadenylation specificity factor subunit 4

K14404

cleavage and polyadenylation specificity factor subunit 4

Organism

aflr Apis florea (little honeybee)

Pathway

aflr03015

mRNA surveillance pathway

Brite

KEGG Orthology (KO) [BR:aflr00001]
09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    100864211
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:aflr03021]
    100864211
   03019 Messenger RNA biogenesis [BR:aflr03019]
    100864211
Transcription machinery [BR:aflr03021]
Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     100864211
Messenger RNA biogenesis [BR:aflr03019]
Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage and polyadenylation specificity factor (CPSF) complex
     100864211

SSDB

Motif

Pfam:

zf-CCCH zf_CCCH_4 Torus zf-CCCH_3 zf-CCCH_2 zf-CCHC zf-CCCH_4 zf-CCCH_12 zf-CCCH_RBM22 zf-CCCH_DUS3L Nab2-like_zf-CCCH_ zf-CCHC_3

Other DBs

NCBI-GeneID:

100864211

NCBI-ProteinID:

XP_003698318

LinkDB

Position

Unknown

AA seq 286 aa
MECLVANVDNMRFDIEIALDEQYGALPLPFTGMDKSTAAVCQFYPRGTCVKGASCPFRHV
RGDRTIVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSRFNACHNKECPFLHIDPETK
VRDCPWYDRGFCRHGPLCRHRHVRRVLCMAYLAGFCPEGPNCKFMHPRFELPAVQDMQPK
EGKKVMITCHFCGEGGHKAIYCNKMPPDVREAQVRQEIEGNSHATHHMNIHNGPPPRGPQ
KPLEEVTCYKCGTKGHYANKCPKGHLAFLSHAGGSGSGTQNQNYRR

NT seq 861 nt +upstreamnt +downstreamnt
atggagtgtttagtggcaaacgtagataacatgcgatttgatattgaaattgctcttgat
gaacaatatggagcacttcctttaccttttactggaatggacaaatctactgctgcagta
tgtcaattttatccaagaggtacttgtgttaaaggagcttcttgtccatttaggcatgta
agaggagatcgtacaattgtatgtaaacattggttaagaggtctttgtaaaaaaggtgat
caatgtgaatttttacatgaatatgatatgacaaaaatgccagaatgttatttctattct
agatttaatgcttgtcacaataaagaatgtccattcctacatattgacccagaaactaaa
gtcagagattgtccctggtatgaccgtggattttgtagacatggaccattatgcagacat
cgacatgttcgtcgtgttttatgcatggcatatttagctggattttgtcctgaaggtcca
aattgtaaatttatgcatccaagatttgaattaccagcagtacaagatatgcaacctaaa
gaaggtaaaaaagtaatgatcacttgtcacttttgtggagaaggtggtcataaagcaatt
tattgtaataaaatgccacctgatgtacgtgaagctcaagttagacaagagatagaaggt
aattctcatgctacacatcacatgaatatccataatggacctccaccaagagggccccaa
aagccacttgaagaagtcacttgttataaatgtggaactaaaggtcattatgccaataaa
tgtccaaaaggtcatttagcatttttgagtcatgctggaggtagtggaagtggtactcaa
aatcaaaattaccgtaggtga

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