Apis florea (little honeybee): 100865018
Help
Entry
100865018 CDS
T09140
Name
(RefSeq) symplekin isoform X2
KO
K06100
symplekin
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100865018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aflr03021
]
100865018
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100865018
Transcription machinery [BR:
aflr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
100865018
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
100865018
U7-dependent histone pre-mRNA processing factors
100865018
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Symplekin_C
SYMPK_PTA1_N
DUF7080
Atrophin-1
Motif
Other DBs
NCBI-GeneID:
100865018
NCBI-ProteinID:
XP_003691953
LinkDB
All DBs
Position
Unknown
AA seq
1111 aa
AA seq
DB search
MDPRIHRRSEPEKGPGDLIVEWLNEASLNPGEDIKVTNLCKVQEILINKEPQLLPLYLDE
ALQFSLDRYAEVRKTITGFIEEAGVKQPEVIPRVVQILLRLVSDESSAVAKRALRASGRI
LRAALKWISSATTVTAEMEVAWNQLSALKIQIINMIDSDNDGIRTQAVKFLEGVVLIQTY
PDPDIPKKPDDFSLEDIPLTLKIARRRKLEEEANDVMDLLIKFHGSPHVSSVNLMTCMGS
LALIAKTRPQFMPGVIQALQRLQHDLPPTLSDSQVTSVQKQLKLTLLGLMKHPASIEFVS
IIAKQLTQLGAKEQEILKAYPKPEDIRRMKKRQQEAAASSAAKRVKIETSLVSDETEIVP
NLIPASKLSELIELSESFISERLSVEIATDLVMDSMAWVPDTMTAIFQREYQPTSTTDIN
IQRQTIAKLLATQIKQAKTKKKKDAKDEDAVMEDLVKNPTISVAEAKRERKREKDREKEK
EARASLEAHEKSLAKTRTRLKALKLSEVTKPLSKEVKEKMLLMAVNRILLSEKTAVFGGV
AAIRSKILTTLAATFNPYIKEAVLHYITDDMRNRLDLALGWLYEEYALLQGFQRRTTLCT
KPQEAPHQAYNFLLCTLVSAIDLVQGKDRDTLLYRLYLEAPLITEDAVEALKMVSSDETR
GLVPLQLLKEMVIRRPTKQLVFLNVLLCHTGHENNTIREAAIQLVCQLYSRPELSKLIEE
YAVLYLGFLRLHIPPEIVFGQDRGRPQVESQWTESTTRACLGLYLALLSEHQDLIHELAR
VYTSMSADVKRIVLRLVEGPVRSLGMGSPQLLALVENCPKGAETLVTRIIHILTEKSAPS
VELVSRVRELYQTRVSDVRFLIPVLNGLTKKEVIAALPKLIKLNPIVVKEVFNRLLGTHN
NESGVPHTSPITPAELLIALHNIDPSKAELKTIIKATSLCFAEKQIYTQETVAVVMQHLM
EMTPLPTLLMRTVIQSLALYPRLSGFVMNILQRLILKQVWKQPKVWEGFVKCCERTQPQS
FAVILQLPPTQLAEALKMASNLRSPLLAHVEAFAENQKAHIPQSIMDVIQGKSPCDMHDE
FDIAPPGDYPIEQKPDTIETDVSEPAPPGLD
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atggatcctcgaatacatagaagatcagaaccagaaaaaggaccaggcgatttgatagtt
gaatggttaaatgaagcttctttaaatccaggagaagatataaaagttacaaatttatgt
aaagttcaagaaatcttaattaataaggagccacaattgcttccattatatttagatgaa
gcattacagttttctttagatagatatgcagaagttagaaaaacaattacaggttttata
gaagaagctggagtaaaacaacctgaagtaattccacgtgttgttcaaatacttttaaga
ttagtttccgatgaatcatcagctgttgctaaaagagctcttagagctagtggtagaata
ttaagagctgctttgaaatggatatctagtgctactacagttacagcagaaatggaagta
gcatggaatcaacttagtgctcttaaaattcaaataataaatatgattgacagtgataat
gatggtattagaacacaagctgtgaaatttcttgaaggtgttgttttaatacaaacatat
cctgatccagatattcctaaaaaacctgatgatttttctttagaagatattccattaaca
ttaaaaatagcacgtagacgaaaattagaagaagaggctaatgatgtaatggatttatta
ataaaatttcatggatctccacatgttagcagtgttaatttgatgacatgcatgggatct
ttagcattgattgctaaaacaagacctcaattcatgccaggtgtaatacaagcattacag
agattacaacatgatttaccacctacattgtccgattctcaagtaactagtgtacaaaag
caattaaaattaactctattaggattaatgaaacacccagctagtatagaatttgtatct
ataatagctaaacaattaacacaattaggagcaaaagaacaagaaattttaaaagcttat
ccaaaaccagaagatatccggcgtatgaagaaacgtcaacaagaagcagctgcatcttct
gcagcaaaacgtgtgaaaattgaaacttctttagtatcagatgaaacggaaattgtaccc
aatttaattcctgcttcaaaattatcagaattaattgaactttcagaaagttttatttct
gaaagattaagtgtagaaattgcaacagatttagtaatggatagtatggcatgggtccca
gacacaatgacagctatctttcaaagagaatatcaacctacttcaacgaccgatataaat
attcagcggcagacaattgctaaattattagcaacgcaaataaaacaagctaaaacgaaa
aagaaaaaggatgctaaagatgaagatgccgtaatggaagatttagtaaaaaatccaact
attagcgtagcggaagctaaacgagaacgaaaacgtgaaaaagacagagaaaaagagaaa
gaagcaagggcatctctagaagcacatgaaaagtcattggcgaaaacaagaactcgttta
aaagctttaaaattgtctgaagttacaaaaccattgtcaaaagaagtaaaagaaaaaatg
ttattgatggctgtgaatcgaattttactttctgagaaaacagctgtgtttggtggcgtg
gcagctataagatcaaaaattttaactactctagctgcaacatttaatccgtacattaaa
gaggcagtattacattatattactgatgatatgagaaaccgtttagatttagctttaggt
tggttatatgaagaatatgcattgcttcagggttttcaaaggcgaactacattatgtaca
aaacctcaagaagctccacatcaggcttataactttttattatgtactttagtatctgca
atagatttagttcaaggcaaagatcgtgatacattattatataggctatatttggaagca
cctttaattaccgaagatgctgttgaagctttaaaaatggtatcttctgatgaaacaaga
ggattggtaccattgcaattattgaaagagatggttattcgtagaccaacaaaacaatta
gtttttctaaatgtattattatgtcatactggtcacgaaaataatacgataagagaagct
gctatacaattagtttgtcaactgtatagtcgtcctgaattaagtaagctcatagaagag
tacgcggttctttatttaggtttcttacgacttcatatacctcctgagatcgtcttcgga
caagatagaggtaggccacaagtagaatcccaatggactgaatcaactacaagagcttgc
cttggattatatcttgctctgttgagtgaacatcaagatttaattcatgaattggcaaga
gtttatacatcaatgagtgcagatgtcaaacgtattgttcttcgattagtagaaggacct
gtaagatctttaggaatgggtagtccacaattattggcattagttgaaaattgtcctaaa
ggcgctgaaacactagttacaagaattattcacattcttacagaaaaatctgcaccaagc
gtggaattagtatcaagggtacgagaactctatcagactagagtttcagacgttcgattt
ttaataccagtcttaaatggtttaacaaaaaaagaagtaatagccgctcttccgaaactc
ataaaattaaatcctattgttgttaaagaagtattcaatagattgttaggtactcataat
aacgaaagtggtgtacctcatacatctcctatcacacctgctgaattgttaatagccttg
cataatatagatccaagtaaagcagaattaaaaacaattataaaagctacgtctttatgt
tttgcggaaaaacaaatatatacgcaagaaactgtagctgttgtaatgcaacatcttatg
gagatgacaccacttccaacattactcatgcgtacagtgatacaaagtttagcattatat
cctagattaagtggatttgttatgaatatacttcagcggttaattctcaagcaagtttgg
aaacagccaaaagtttgggaaggtttcgtaaaatgttgtgaacgcacgcagccacaaagt
tttgcagttattttacagcttcctccaacacagttggccgaagcgctaaaaatggcaagc
aatttacgatcacctttactagctcatgtcgaagcctttgccgaaaatcagaaagcgcac
attccgcaatcaataatggatgttattcagggtaaatcaccttgtgacatgcatgatgaa
tttgatattgcaccacccggtgattatccgattgaacaaaaaccagatacaatagaaact
gatgtttcagaaccagctcctcctggtttagattag
DBGET
integrated database retrieval system
