Apis florea (little honeybee): 100865339
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Entry
100865339 CDS
T09140
Name
(RefSeq) protein CASC3 isoform X1
KO
K14323
protein CASC3
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03013
Nucleocytoplasmic transport
aflr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100865339
03015 mRNA surveillance pathway
100865339
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100865339
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
100865339
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Btz
Motif
Other DBs
NCBI-GeneID:
100865339
NCBI-ProteinID:
XP_003690026
LinkDB
All DBs
Position
Unknown
AA seq
817 aa
AA seq
DB search
MSDTRRRRKSNQSCGSDDLSDSCEELNATKETQSSEQTDGHQDSECEIYPSDSDAESQDG
ALRESGDGQEEEKPQKKLDDDEDRRNPQYIPKRGTFYEHDDRTTDEVIDSAAESQSERET
KEKKVWKDKEDRWDHDRYNDEEQAPKSHEELIAVYGYDIRNEEGPPRARRRRRYGRGPNK
YTRNWEDEDAYGKPGSNILNRNRRFNRSGEDFPALGTNKNASTHVEEPVISSAWYSSKNK
SQNKVPNFPPLQTQNDSSKTKSSHTSTTHTNENKAPNEPTNPAWKKDTKHSPHTQNSNGN
SGAGGDADKLVNIKTSPRDNNKRNIQESVSLAASKTRGRGFRTNANNNMVTNRTVETKPK
GRGAGPISTENKRNNIRSDDEQQITHDMKHVNVNDSAQYHQSGRHNKSFYGQSSNQQRTG
TVPPRMQQQSHSQQQQPQQQQQQQSIQQDSSANRPKRYSSLRQRPTISDNPGQQNYPPQH
GQHNQHSQHSQHSQHSQHSQHNQHGQHGQHGQHGYFSPQAGNSRGVLDSQGYPQSHFEQS
TPVATATAPLAGQPVIPIPPNGQPASYAPPPFLVPPPQFIPPQTPASIINYVSGPNGPAF
QPNYQGYQGYSPPVQPQRPPPPQELFQPQGCTYYSPAQQQQQSAPMRRPKAAIPILPPPE
NQQHQTGRGRGRSTQPQQINQPGSIQQTEQEVKTNSVEDDQKIISEQFDNMQIEQPTDVQ
ETQKVEDTSVIMNTVIENTEKVENIKNIEPEATVNLENTTADQLNDISANDSSKVIINEQ
DIIPLKSTQVIIEETKNDSNKIESTATEITAVEETAA
NT seq
2454 nt
NT seq
+upstream
nt +downstream
nt
atgtcggatacaagacgacggcgaaaatctaatcagtcttgtggttctgatgacctctcg
gactcttgtgaagaattaaatgcaacgaaagaaacccagagcagtgaacagactgatggt
caccaggattcggaatgtgaaatttatccttctgattctgatgctgaatctcaagatggt
gcattgcgagaaagtggtgatggccaagaagaagaaaaaccacaaaaaaaattagatgat
gatgaagatagacgtaatccacaatatattcctaagagagggacattttatgaacatgat
gatagaacaactgatgaagtaatagatagtgctgctgaatcacaaagtgaaagagaaacc
aaagaaaaaaaagtgtggaaagataaagaagatagatgggatcatgatcgatataatgat
gaagagcaagcaccaaaaagtcatgaagaattaatagcagtttatggttatgatataaga
aatgaagaaggtcctccaagagctagaagaagaagaagatatggtcgtggacctaataaa
tatacacgtaattgggaagatgaagatgcatatggaaaacctgggagtaacattctaaat
agaaatagaagatttaatagaagtggtgaagattttccagctctaggaacaaataaaaat
gcttctacacatgtagaagaaccagtaatctcctcagcttggtacagtagtaaaaataaa
tcacaaaataaagtaccaaattttccacctctacaaactcaaaatgatagctcaaaaacg
aagtctagccatacatctactactcatacaaatgaaaataaagctcctaatgaacctaca
aatccagcttggaaaaaagatactaaacattcacctcatacacaaaatagtaatggaaat
agtggagctggtggtgatgccgataaattagttaacataaaaacctctccaagagataat
aacaagaggaacattcaagagtctgtaagcttggcagcgagtaaaactcgtggacgagga
ttcagaacaaatgctaataacaatatggtcaccaatagaacagttgagactaaaccaaag
ggacgtggagcgggtccgatttccacagaaaataaaagaaataatatacgaagtgatgat
gaacaacaaattactcatgacatgaaacatgttaatgttaatgatagtgctcaatatcat
caaagtggaagacataataaaagcttttatggacaatcctcaaatcaacagaggacagga
actgtacctccaagaatgcaacaacaatctcattcacaacaacaacaaccacagcaacaa
caacaacaacaatcaattcaacaggacagttctgccaataggccaaaacgttattctagt
ttgcgacagcgacctactatttcagataatccaggtcaacaaaattatccaccacaacat
ggacaacacaatcaacatagtcaacatagtcaacatagtcaacacagtcaacacagtcaa
cataatcaacatggccaacatggccaacatggtcaacatggatatttttctcctcaagct
ggaaattcaagaggtgttttagattcacaaggatatcctcaaagtcattttgaacaatct
acacctgttgctactgcaactgcacctttggctggacaacctgtgattcctataccacct
aatggtcaacctgctagttatgctccaccaccatttttagtaccaccaccgcaatttatt
cctccacagactccagctagtataattaattatgtttctggtccaaatggaccagcattt
caaccgaattatcaaggttatcaaggctatagcccaccagtacagccacagcgtcctcca
cctccacaagaattgttccaaccacaaggttgcacttattatagtccagctcaacaacaa
caacaatcagctccgatgagacggccaaaggcagctattcctattcttccaccacctgaa
aatcaacaacaccaaaccggacgaggaagaggtagaagcacacagcctcaacaaattaat
caacctggtagtatacaacagactgaacaagaagttaaaactaattcggtggaagacgat
cagaagattatatcagaacaatttgataatatgcaaatcgaacagcctacagatgttcaa
gaaacacagaaagtcgaagatacgagtgtaataatgaatactgtgattgagaatactgaa
aaagttgagaatattaaaaatatcgaacctgaagctacagtgaatttagaaaatactact
gcggatcaattaaatgatataagtgctaatgattcatctaaagtcattataaatgaacaa
gatattattccacttaaaagtacgcaagtaataattgaagagactaaaaatgattcaaat
aaaattgaaagcactgcgactgaaattacagctgttgaagaaacagcagcttga
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integrated database retrieval system