Apis florea (little honeybee): 100865448
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Entry
100865448 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IX) chain
KO
K06823
collagen type XVIII alpha
Organism
aflr
Apis florea (little honeybee)
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aflr04147
]
100865448
00535 Proteoglycans [BR:
aflr00535
]
100865448
00536 Glycosaminoglycan binding proteins [BR:
aflr00536
]
100865448
Exosome [BR:
aflr04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
100865448
Proteoglycans [BR:
aflr00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
100865448
Glycosaminoglycan binding proteins [BR:
aflr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100865448
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Endostatin
Collagen
Collagen_trimer
Laminin_G_3
DUF1554
Motif
Other DBs
NCBI-GeneID:
100865448
NCBI-ProteinID:
XP_012348835
LinkDB
All DBs
Position
Unknown
AA seq
1177 aa
AA seq
DB search
MRSRLQSLIFALFCVTRVNADFFAEKKEINYDLLEAAMASVDTDDNNLYMDDGLDGFPSF
GFRPGSEVKQPYRLYLPEKLPAEFTLVATFKPMSFRTSYLFAVLNPFETVVQLGIRISDG
PGTNQNVSLVYTNSDLHSHSEEVAKFTVPKLSRKWSKIVIRVSTTDVTLYLNCHEMARQR
VTRIPLELVFDTASTLYIAQAGPHIQEKYDGLLQSLKLYPGHPADLVKCTADFNFDQDVD
LGSGEIDNEVIDNGSGFDINLTDIGRDDDEDRSEESNPPPFITPPPPNPDYKGPKGEKGD
KGDKGESVRGPPGPPGPPGQDEGPPGKKGEPGTCTCNATALMASFTMPKMIQGPKGEQGV
PGQEGKQGQMGLTGVAGPPGERGLEGPQGPKGDKGDVGIPGPEGPQGQKGEPGRDGIPGE
KGAQGPPGPPGKGEFSGYDPSWKPRGIYRTEGITMRPGLPGQKGEAGLPGSPGPKGETGI
AGAKGNKGEPGHKGAKGDHGNEGARGIQGSKGEPGAPGAPGLPGAPGENGRPAEKGDKGD
TGPEGXPGPPGAPGPPGLPGLSGPGGLNIGESSIKEKGDKGESGARGYKGDKGTKGEKGD
KGDSGPAGIPGVNGIQGPQGNKGEPGKDGVAGVQGIAGAKGEKGERGPPGATAIASSGDY
ITIKGEKGAEGKRGRRGRPGPPGPVGPPGKPGAMGEIGLPGWVNTMKGRPGTPGLPGPVG
PAGPKGEKGEPGTPSPYGVSVGVKGDKGDDGFPGIPGQPGREGQRGPPGPPGPPGPPSQG
NYIPVPGPPGPPGPPGPPGLSLIGQKGEPGIGRSHIFGERDYYGVRQVQSVKKKHIPYPT
LQGPRTSLDELKALRELKQLKELKEHLGAGTTATRGPLESTTKIVPGAVTFQNTEAMTKM
SAVSPVGTLAYIIDEQALLVRVNNGWQYIALGSLLPITTPAPPTTSPPPVNPPFEASNLI
NQIPVKADGTGWYPRMLRMAALNEPFTGDMHGVRGADYACYRQAKRAGLRGTFRAFLSSR
VQNVDSIVRLGDRDLPIVNIKGDVLFNSWKEMFNGNGAYFSQNPRIYSFNGKNILTDFAW
PEKVAWHGSHKLGDRAMDTYCDAWHSSSSDRYGLGSPLTGGRLLEQVRYSCDNKFALLCI
EVTSETTRRRRNVEVTEDEDEMSENDYKEYLDSLMED
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgcggtctagattgcagtcgctgatattcgccctgttctgtgtaacgcgcgtcaacgcg
gactttttcgccgagaagaaagaaataaattatgatttactcgaggctgccatggcgtct
gtcgatacggacgacaataatttgtacatggacgatggtctcgatggatttccaagtttt
ggcttccgacccggatccgaagttaaacaaccctatcgattatatctgccagaaaaattg
ccagcagagttcacccttgtggcaactttcaaaccgatgtccttcaggaccagttatctc
ttcgcggttttgaatccctttgaaacagtggtgcaattaggaattcgtatatcggatgga
ccaggcaccaatcaaaatgtctcattggtttacaccaattccgacttgcattcgcattca
gaagaggtggcgaaattcacggtgccgaagttgtcgagaaaatggtctaaaatcgttatt
agagtatcaacgacggatgtcactttgtatctgaattgtcacgagatggccaggcaacga
gtgacaagaattcctctggaattggtgttcgacacagccagcacgttgtacatcgctcaa
gctggacctcatatccaagaaaagtacgatggtctactgcaatccttgaagctctatccc
ggacatccagcagatttggtaaaatgcacggccgactttaacttcgaccaagatgtggat
ctcggctcaggtgaaatcgataacgaggtgatcgataatggttcaggatttgatattaat
ttgacagacatcggacgagacgatgacgaagacagaagcgaggaaagcaatccaccgcca
ttcatcacaccccctcctcccaacccggactacaagggaccgaaaggtgagaaaggtgat
aaaggcgacaagggtgagagcgttaggggacctccaggtcctcctggtccacctggtcaa
gatgagggtccgccagggaagaaaggagaacccggcacgtgcacctgcaatgcaacagcc
ctgatggcatcctttacgatgccaaagatgatccagggaccgaaaggagaacaaggggtg
ccggggcaagaaggaaaacaaggccaaatggggctgacgggtgttgctggaccaccagga
gagagaggactagaagggccacaaggccccaagggagataaaggtgatgtgggaataccg
ggaccagaaggtcctcaagggcaaaaaggagaacctggccgcgatggaataccaggagaa
aagggcgctcaaggacctccaggacctccaggaaagggagaattctctggatacgatccc
agttggaaaccccgaggcatttataggacggaaggcatcacgatgaggccaggactacca
gggcagaaaggcgaggcaggccttccgggaagtccaggaccaaaaggagagacaggaatc
gctggtgccaaaggtaacaaaggcgagccaggccacaaaggcgcgaaaggggatcacggg
aatgagggtgctcgaggaattcaaggatcgaagggtgaacctggtgcaccgggagcgccc
ggtctccctggtgcgccaggtgagaatggaaggccagctgaaaagggtgataaaggagac
acaggaccagaagggnaaccaggccctccgggagcacctggaccgccaggattgcctgga
ttaagcggtcctggaggattaaatattggagaatcgagtattaaggaaaaaggtgacaaa
ggagagagtggtgcgcgtggttataaaggagacaagggcacgaaaggcgagaagggagat
aaaggtgattctggaccagccggaattcccggtgtaaatggtattcaaggaccgcaaggg
aacaaaggcgagccaggcaaggatggagttgccggtgttcagggaatcgcgggtgcaaaa
ggtgaaaaaggtgagagaggtccgccaggagccaccgctatagcgagctccggagactac
atcacgatcaagggtgaaaagggcgcagaggggaagagagggaggagagggcgccctgga
ccaccgggacccgtcggcccacctggaaagccgggagcgatgggagaaattgggttacct
ggatgggtgaacaccatgaaaggtcgtcctggaactcccggacttcctggacctgttgga
ccagcggggcccaagggagaaaaaggagaaccgggcacaccgagcccttatggagtttct
gttggcgtaaagggtgataaaggagacgatggtttccctggaattccaggacaaccagga
agggaaggtcaaagagggccgccaggacctccagggccgcctggaccaccatctcaagga
aattatattccagtcccgggacctccaggacctccaggaccaccaggtccacccggatta
tctttaatcggacagaaaggagagccaggaatcggcagaagtcatatctttggtgaaaga
gattattacggagttagacaagttcaaagtgttaaaaaaaaacacattccatatcctacg
ctgcaaggaccaagaactagtctagacgaattgaaagcactgcgggaattaaaacaattg
aaggaattaaaagaacatttaggtgctggaacaaccgcaaccagaggtcctctcgaaagc
acaacgaagattgtaccaggagcagtaacttttcaaaataccgaagctatgacgaaaatg
tctgccgtgagcccagttggaacattagcttacattatagacgaacaagcgctactcgtt
agagtgaacaatggctggcaatatattgcattgggctcacttttaccaataactacacca
gcaccaccgactacatcaccacccccggtgaatccaccttttgaggcttctaacctgatc
aaccaaatacccgtaaaagcagatggaacagggtggtatccacgaatgttacgaatggct
gctttgaacgaaccctttaccggggacatgcacggtgtacgaggagctgactacgcttgt
tatcgacaagcgaaacgagctggtttgaggggtacattccgcgcattcctcagctctaga
gttcaaaatgttgacagcattgtgaggctcggagatcgagatttgcccatcgttaacata
aagggagatgttctcttcaactcgtggaaggaaatgttcaacggaaacggggcctatttc
tcacaaaatccaagaatctacagtttcaatgggaaaaatattctcactgattttgcatgg
ccagaaaaagtggcatggcacggatcacacaaattaggagaccgagcgatggacacgtat
tgcgacgcttggcattcaagtagttcggatcgttacggattaggatcaccgttaacagga
ggacgcctcttggaacaagttcgttattcctgcgacaacaagttcgcgctactctgtata
gaagtaaccagcgagaccacaaggaggaggagaaatgtcgaagttacggaggacgaggac
gaaatgtcggaaaacgattacaaggaatacttggattctctgatggaagactaa
DBGET
integrated database retrieval system
