Apis florea (little honeybee): 100865842
Help
Entry
100865842 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03440
Homologous recombination
aflr03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100865842
03450 Non-homologous end-joining
100865842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aflr03032
]
100865842
03400 DNA repair and recombination proteins [BR:
aflr03400
]
100865842
DNA replication proteins [BR:
aflr03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
100865842
DNA repair and recombination proteins [BR:
aflr03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
100865842
BRCA1-C complex
100865842
NHEJ (non-homologous end-joining)
MRX complex
100865842
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_23
AAA_15
AAA_21
Rad50_zn_hook
SMC_N
SbcC_Walker_B
AAA_29
AAA_5
AAA_16
HTH_34
AAA_19
ABC_tran
AAA_13
AAA_22
Motif
Other DBs
NCBI-GeneID:
100865842
NCBI-ProteinID:
XP_003697729
LinkDB
All DBs
Position
Unknown
AA seq
1383 aa
AA seq
DB search
MSRIRRLSIRGIRNFGDEKEEALIRFSRPLTLILGPNGTGKTTIIEALKFATCGEFPPGS
DRGKSFIHDPTLSTTSSVRGVIRAEIIDVIGNTYTICRTIESTKANVTVRFKTLDSALSR
VNKDTKEVISITNRCTNVDTELTLAMGVSKPILDYVIFCHQEDLNWPFQDGKKLKERFDE
IFDSAKFNKALESIMKLIKDLKQRVNILKEQKQNYQFTVNEVIDKETKLEDNKKRLENSK
IKIEEFNKELEPVIQKIKKLEKIDVEYKDLQSEQKRKKAEYDMFKQQLDSLKENLQNIFE
DTTEKLLKEIESYDEELIKKINEIDEFKKSLRDIAEKESTISNKLANERVTNGSLRQQIK
DHEKKVILRNQILNESLSSWNLNVVDSNVVSELEIIAFTKRLQEKMRELEHKLEENKIKR
EEEEKELQKIVDILRHKYSKLDIEKNFKENEIIETRKEIDKIKLDIMQLNAESNKLNFIE
SKLQKVQTRIQQLNDAINVDTMKKEIADKIKIRDEMDTLLNTIDEEITLLLKQSSLQTEL
ELNKSTLLIKEKEIEKLKKKHEEKIISLLNIKDISQIKLKNNFDMVQKELINEIESINQN
IRTEEHQIATLETTISHIEHELQNKKKEINLNKEKISSICSYKNFDEVLLLQSKKVKDLQ
DKKGMYTHQSAAYKEYIKQLRNTNPCCPLCHRGFDKIETITTLLKEMETEIENHPNRLKE
CEKELKVQQEKYDKMLQLKPVVERIIQLEEIELEKLTSNLEKFKNKLNESQTTAIELKTK
NLXSXKKLVMCKDIIGDVMLWDTYIDDIFKLKQIIDDFHIRMAAAGIKTKRSLQEAQTER
EELKISLKKIRENIERLQSEINMHNEKLHNAQQEENILHKEQLKIQLDMQKLKELKDNQE
ILYLKEISLGKSIDTLREEVTLSETELNSGLDKLEKKKYIFHKDNWEKQETDRKLITEGS
RRLSDLQKMQDDVDSFIYRKIPESLECSESKIKSYEKLLNELFCKKNDMETTINKLKEEM
TRQEVRKRELLDNLKLRETQEIINNLQEQYSNIKERLNTINYSEIFDEWQNLQCREQTIL
RQKNMIKGNQEELERTVQQYIQELKKDIYKQARKNYKSKCIELTVIEESILNLKEYSKVL
DTAMIQYHEERMTTVNRIIKQLWKLVYTGTDTTSIEIRTDATEGIGGTKRTYNYKLVQMK
HGHEIDMKGRCSAGQKVLASIIIRLALAETFCKDCGILALDEPTTNLDQENADSLANTLA
TVVKLRSQHQKNFQLIVISHDEKFLFKLAELSSNKGFYQLYRKQTGYSTVKYCLVENQYH
FASNDIKEESDEEIDEHSSRDKLQYEISLGGKMHNEQTYNRKRNIEDDDFTENRMSKKRY
VFQ
NT seq
4152 nt
NT seq
+upstream
nt +downstream
nt
atgtcacgaataagaagactttctattcgtggtattcgtaattttggtgatgagaaagaa
gaagctttgattagattttctcgtcctttaacacttattcttggtccaaatggtactgga
aaaacaacaattattgaagctcttaaattcgctacttgtggtgaatttccacctggttca
gatcgcggaaaatcttttatacatgatccgactttatcaacaacttcatcggttcgaggt
gttataagagctgaaataattgatgtaataggtaatacatatacaatatgtagaacaata
gaaagtacaaaagctaatgtgacagtaagatttaaaactcttgatagtgctttaagtaga
gtaaataaagataccaaagaggtcatatcaataactaatcgatgtactaatgttgataca
gaacttacattagcaatgggagtttctaaacctattttagattatgtaattttctgtcat
caagaagatcttaattggccttttcaagatggtaaaaaattaaaagaaagatttgatgaa
atctttgatagtgctaagtttaacaaagctcttgaaagcattatgaaattaattaaagat
ttgaaacaaagagttaatatattaaaagaacaaaaacaaaattatcaatttactgttaat
gaagtaatagataaagaaacaaagcttgaagataataaaaaacggttggaaaattccaaa
attaaaattgaagaatttaataaggaattagaacctgtgattcagaaaattaaaaaattg
gaaaaaatagatgttgaatataaagatctacaaagtgaacaaaagaggaaaaaagcagaa
tatgatatgtttaaacaacaattggatagtttaaaagaaaatttacagaatatatttgaa
gatactacagaaaaattattaaaagaaatagaatcatatgatgaagaattaattaaaaaa
attaatgaaattgatgagtttaaaaaaagcttaagagatattgctgaaaaagagtctaca
atatcaaataaattagccaatgaaagagtaactaatggttctttgagacaacaaattaaa
gatcatgagaaaaaagttattcttcgcaatcaaatattaaatgaatcattatcttcctgg
aatcttaatgttgttgattcaaatgttgtatcagaattagaaataatagcttttactaaa
agactacaagaaaaaatgagagaattagaacataaattagaagaaaataaaataaaaaga
gaagaagaagaaaaagaattgcaaaaaatagttgatattttgcgtcataaatattcaaaa
ttagacatagaaaaaaattttaaagaaaatgaaataattgaaacaagaaaagaaattgat
aaaataaaattggatattatgcagcttaatgcagagtcaaataagttaaattttattgaa
tcaaaattacaaaaagtacaaacaagaattcaacaattaaatgatgcaataaatgtggat
actatgaagaaagaaattgctgataagattaaaattcgagatgaaatggacacactttta
aatacaattgatgaagaaattactttattattaaaacaaagttcattacaaactgaatta
gaattaaataaatctacattacttattaaagaaaaagaaatagaaaaattgaaaaagaaa
catgaagaaaaaataatttctttacttaatatcaaagatatatctcaaatcaaattaaaa
aataattttgacatggttcaaaaagaattgataaatgaaatagaatctattaatcaaaac
attcgaacagaagaacatcaaatagctacattagaaacaacaatatcacatattgaacat
gaacttcaaaataaaaagaaagaaataaatttgaataaagaaaaaatttcatcaatttgt
tcatataaaaattttgatgaagtattattattacaatcaaagaaggtaaaagatcttcaa
gataaaaagggaatgtacactcatcaaagtgcagcttacaaagaatatataaaacaatta
agaaatacaaatccttgttgtcctttatgtcacagaggttttgataaaattgaaactatt
acaaccttattaaaagaaatggaaactgaaatagaaaatcatccaaatcgtttgaaagaa
tgtgaaaaagaattgaaagtacaacaagaaaaatatgataaaatgctgcaattaaaacct
gtcgttgaaagaataatacaattagaagaaattgaattagaaaaattaacgagtaattta
gaaaagttcaagaataaattaaatgaatctcaaacaactgcaatagaattaaaaacaaaa
aatctannatcctgaaaaaaattagtaatgtgtaaagatattataggtgatgttatgtta
tgggatacttatattgatgatatttttaaactaaaacaaataattgatgattttcatatt
cgtatggctgctgcaggtattaaaacaaaacgtagtcttcaagaagctcaaactgaaaga
gaagaattgaaaatatctttaaaaaagattcgtgagaatattgaaagattacaatctgaa
ataaatatgcataatgaaaaattacataatgctcaacaggaagaaaatatattacataaa
gagcagttaaaaatacaattagatatgcaaaaattgaaagagttaaaagataatcaagaa
attttatatttgaaagaaatttctcttggaaaatcaattgatacattaagagaagaagtg
actttatcagaaactgaattaaattctggacttgataaattggaaaaaaaaaagtatatt
tttcataaagataattgggaaaaacaagaaaccgatagaaaattaataacagaaggaagt
agacgtttatctgatttacagaaaatgcaggatgatgttgatagttttatatatcgtaaa
attcccgaatctttggaatgttctgaatcaaaaataaaaagttatgaaaaattacttaat
gaattattttgtaaaaaaaatgatatggaaacaacaattaataaattaaaagaagaaatg
actcgtcaagaagtgcgaaaaagagaattgttagataatcttaaacttcgtgaaactcag
gaaattattaacaatttacaagaacaatattcaaatataaaggaaagattaaatacaata
aattattctgaaatatttgatgaatggcaaaatttacaatgtcgagaacaaactatactt
cgacagaaaaatatgattaaaggtaatcaagaagaattagaaagaacagtgcaacaatat
attcaagaattaaaaaaagatatatataaacaagctcgtaaaaattacaaaagcaaatgt
attgaattaacggttatagaagaatctatattaaatttaaaggaatatagcaaagtattg
gatacagctatgatacaatatcatgaagaacgtatgaccacagttaatagaatcataaaa
caattatggaagcttgtatatactggaacagatacaacttctatagaaattcgtacagat
gcaactgaaggaataggtggtacaaaaagaacatacaattacaaattagttcaaatgaaa
catggtcatgaaatagatatgaaaggtcgttgtagtgctggtcaaaaagttttggcatcg
ataattataagacttgctttagcagaaacgttttgtaaagattgcggaattctcgccctg
gatgaaccaacgacaaatttggatcaagaaaatgctgatagtctagcaaatacattggct
acggttgttaaattacgatcacaacatcaaaaaaattttcaattaattgtaattagtcat
gatgaaaaatttttattcaaattagctgaattaagcagtaataaaggcttttatcaactt
tatcgtaaacaaaccggttattcaacagttaaatattgtttagtagagaatcaatatcat
tttgcatcaaatgatataaaagaagaatctgatgaagaaatcgatgaacattcttcacga
gataaattacaatatgaaataagtttaggagggaaaatgcataatgaacaaacttataac
agaaaaagaaacattgaagatgacgattttactgaaaatagaatgtcaaaaaaaagatat
gtctttcaataa
DBGET
integrated database retrieval system
