Apis florea (little honeybee): 100866053
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Entry
100866053 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DHX8
KO
K12818
ATP-dependent RNA helicase DHX8/PRP22 [EC:
5.6.2.6
]
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100866053
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aflr03041
]
100866053
Enzymes [BR:
aflr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100866053
Spliceosome [BR:
aflr03041
]
Complex C
Other components
Step II factors
100866053
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
S1
Helicase_C
HA2_N
DEAD
AAA_22
GIPC1_GH2
AAA_19
nSTAND3
AAA_30
AAA_16
ABC_tran
Motif
Other DBs
NCBI-GeneID:
100866053
NCBI-ProteinID:
XP_003697661
LinkDB
All DBs
Position
Unknown
AA seq
1192 aa
AA seq
DB search
MDEVAKLEHLSLVSKICTELENHLGLNDKDLAEFIIHLAEKNNTFDXFKKVLIENGAEFS
ESFMANLLRIIQHMKPTKSQEKLSKSTTKQDELAQKFPVLALPNEEPKTVDDIVSSAMAS
LEELAPSKKSNKQDSKKDDQSNDNNDKKNRHSRRSRSKDRRRHKSRSPYRKDRRHKSRSR
SRSKSRDRSRSRDKRRHRSRDRKRSRSRDRKFHRDRYSNKSDRSRSRSAEELSMDPEVGK
IYSGKVANIVPFGCFVQLEGLKRRWEGLVHISQLRREGRVASASDVVSRGQKVLVKVLNI
GGQKVSLSMKDVDQETGRDLNPVVTVTKTEEDEKHLRNPDRPTSLLELQGNWDEDETYSR
KRVQRLSSPEKWEIKQMLAASCIDRSELPEFDMETGILPREDDEEEDVEIELVEEEPPFL
HGHGRALGDLSPVRIVKNPDGSLAQAAMMQSALAKERREQKMLQREQEMDSVPTGLNKNW
IDPLPEAESRTLAANMRGIGLQTQDLPEWKKHVIGGKKSSFGKKTNLTLLEQRQSLPIYK
LRDDLVKAVTDNQILIVIGETGSGKTTQITQFLGEAGFTARGKIGCTQPRRVAAMSVAKR
VAEEFGCRLGQEVGYTIRFEDCTGPETNIKYMTDGMLLRECLMDLDLKTYSVIMLDEAHE
RTIHTDVLFGLLKQAVRRRPDLKLIVTSATLDAVKFSQYFFEAPIFTIPGRTFEVEVMYT
KEPETDYLDAALITVMQIHLREPPGDILLFLTGQEEIDTACEILYERMKSLGPDVPELII
LPVYSALPSEMQTRIFEPAPPGSRKVVIATNIAETSLTIDGIYYVVDPGFVKQKVYNSKT
GMDSLIVTPISQAAAKQRAGRAGRTGPGKCYRLYTERAYRDEMLPTPVPEIQRTNLATTV
LQLKTMGINDLLHFDFMDAPPVESLIMALESLHSLSALDNEGLLTRLGRRMAEFPLEPNL
SKMLIMSVHLQCSDEILTIVSMLSVQNVFYRPKDKQALADQKKAKFNQPEGDHLTLLAVY
NSWRNNKFSNAWCYENFVQIRTLKRAQDVRKQLLGIMDRHKLDVVSAGKNTVRIQKAVCS
GFFRNAAKKDPQEGYRTLVDSQVVYIHPSSALFNRQPEWVIYHELVQTTKEYMREVTTID
PKWLVEFAPAFFKFSDPTKLSKFKKNQRLEPLYNKYEEPNAWRISRVRRRRN
NT seq
3579 nt
NT seq
+upstream
nt +downstream
nt
atggatgaagttgctaagcttgaacatttatcattagtatcaaaaatttgtacagaacta
gaaaatcatttaggattaaatgacaaagatttggctgaattcataattcatttggcagag
aaaaataacacatttgatnaatttaaaaaagttcttatagaaaatggagcagaattttcg
gaatcttttatggctaatctgttaagaataatacagcatatgaagccaactaaatctcaa
gaaaagttatcaaaatctacaacaaaacaagatgagttagctcaaaaatttcctgttttg
gctctaccaaatgaggaaccaaaaacagtagatgatatagtcagtagtgctatggcaagt
ttagaggaattagcaccatcaaaaaaatctaacaaacaggatagcaaaaaggatgatcaa
tcaaatgataataatgataaaaaaaatagacattctagaagaagtagatcaaaagacaga
agaagacataaatcacgttcaccatatcgtaaagatagaagacacaaatccagatctaga
tcccgttcaaaatcacgagatcgatcaagatctagagataaaagacgtcatagatctcga
gatcgtaagagatctagatcgagagatagaaaatttcatagggatagatattctaacaag
tctgatcgatctaggtcacgatctgcagaagaactttccatggatccagaagttggtaaa
atttattcaggaaaagtagctaatatcgtaccttttggttgtttcgttcaattagaaggt
ttgaaacgaagatgggaaggcttggttcatatttcacaattaagaagagagggaagagtt
gcgagtgcgagtgatgtagtatccagaggacaaaaagtgcttgtaaaagttctcaatata
ggtggacaaaaagtttctttaagcatgaaagatgttgatcaagaaactggtagagatctg
aatcctgttgtaactgttaccaaaaccgaagaagatgaaaaacatttaagaaatccagat
agacctacttctttgttagaacttcagggtaattgggatgaagatgaaacttattctagg
aaacgagtgcaaagattatcatctccagaaaaatgggaaattaaacagatgcttgctgct
tcttgtatcgatagaagtgaattgccagaattcgatatggaaactggaattcttccacgc
gaggatgatgaagaagaagatgttgaaatagaattagtggaagaagaaccaccattttta
catggacatggaagagctctgggagatttaagtcctgttcgtatagtaaaaaatcctgat
ggttctttagcacaagctgcaatgatgcagagtgctttagcaaaagaaagaagggaacaa
aaaatgttacaaagagaacaggaaatggattctgttccaacaggtcttaataaaaattgg
atcgatcctttacccgaagctgaaagcagaactttagctgcaaacatgcgcgggattggt
cttcaaactcaagatcttcctgaatggaaaaaacatgttataggaggaaaaaaatcttcc
tttggcaagaaaacaaatttaactcttcttgaacagcgtcagagtttaccaatatataaa
ctcagggacgatttagttaaagctgttactgataatcaaattctgatcgtaattggtgaa
acaggatcgggaaaaactactcaaattacacagttcttaggtgaagcaggatttactgcc
cgtggaaagatcggttgtactcaacctagaagagtagcagctatgtctgttgctaaaaga
gtggcggaagaatttggttgtcgtttaggacaagaagttggttatacaattcgttttgaa
gattgtactggaccagaaactaatataaagtatatgactgatggtatgttgcttcgagaa
tgtcttatggatctcgatttgaaaacatattctgtaattatgttggatgaagcacatgaa
cgaactatacacacggatgttctttttggattattgaaacaagctgtacgccgtagacca
gatttaaaattgattgttacaagtgctactttagatgctgtaaagttttcccaatatttt
tttgaagcacccatttttactattcctggcagaacatttgaagttgaagtcatgtatact
aaagaacctgaaacagattatttagatgctgcactaataacagtaatgcaaatacattta
agagaacctccaggagacatacttctattcctgactggtcaagaagaaatcgatacagct
tgcgaaattttatatgaacgtatgaaatctttaggtcccgatgtgcctgaattaattatt
ttacctgtatattcggcacttccttcggaaatgcagactagaatattcgaaccagctcca
cctggttccagaaaagtagtgatagctactaatatagcagaaaccagtttaactatcgat
ggaatttattatgtagttgatccaggatttgttaaacagaaagtatataattctaaaact
ggaatggatagtcttatagtaacaccaataagtcaagcagctgcaaagcaaagagctggt
agagctggaagaactggaccaggaaaatgttatagactttacacagaaagagcttacaga
gatgaaatgcttccgacgccagttccagaaattcaacgtactaatttggcaaccacagtg
ttgcaattgaaaactatgggtatcaatgatttgttacactttgattttatggatgctcca
cctgtggaatctcttattatggctttagaatctttgcatagcttaagtgcattagataat
gaaggtttgttaactagattaggcagaagaatggcagaatttcctctagaacctaattta
tctaaaatgctcattatgagtgtgcatcttcaatgttctgatgaaatattaactattgtc
agtatgttatctgttcagaatgtcttttatagaccaaaagataaacaagctttagcagat
caaaagaaggccaaattcaatcaaccagaaggtgatcatttaactttgttagcggtttat
aattcctggagaaataacaaatttagtaatgcatggtgttacgaaaattttgtacaaatt
agaacattaaagcgcgctcaggatgttcgaaaacaattattaggtataatggatagacac
aaattggatgtagtatctgctggtaagaacactgtaagaattcagaaagctgtttgttct
ggtttctttcgaaatgctgcgaaaaaagatcctcaagaaggatatagaactttagtagat
agtcaagttgtttatattcatccaagtagcgcattatttaatagacaaccagaatgggtc
atttatcatgaattggtacaaacaacaaaagaatatatgagagaagtgacaactatagat
ccaaaatggttagtagagtttgctccagcatttttcaagtttagtgatccaactaaactg
agtaaattcaagaaaaatcaaagattagaaccgctttataataaatatgaagaaccgaat
gcttggcgaatatcaagagttcgaagaaggcgtaattaa
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integrated database retrieval system
