Apis florea (little honeybee): 100867875
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Entry
100867875 CDS
T09140
Name
(RefSeq) probable DNA mismatch repair protein Msh6
KO
K08737
DNA mismatch repair protein MSH6
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100867875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aflr03400
]
100867875
DNA repair and recombination proteins [BR:
aflr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100867875
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_22
ARM_CUL7_CUL9
Motif
Other DBs
NCBI-GeneID:
100867875
NCBI-ProteinID:
XP_012344684
LinkDB
All DBs
Position
Unknown
AA seq
1128 aa
AA seq
DB search
MSKVNTLYNYFTSPKTPKTPKLNNKQISDEKSTTPKRARRQLNKAKTPSKGKENKNLEDR
KRIYKDDEEEEKEENEPIQIKKRRLIIPDEESGEDSGDEFKPDLDEESEESDSGSEGVSE
SEPPTASEEESPEKKRKLINSNGRKPQKGAKKNFKEDKKESKLQQQNQSQGSNNVIDSWP
HLKYDFLQPNKIRDINKKPLSDSDYDSKTLYVPLDFLNQQTPAMRQWWELKSKHFDCVLF
FKLGKFYELYHMDAVIGVNELHLTYMRGEFAHSGFPEIGYGRFSASLIERGYKVARVEQT
ENPDMMAQRVSNMIRPTKFDKVVKREICQITSKGTRVYTPQDIEPSTPNSNYLLSVIEKC
SSGSNISHYGVCFLDTTIGDFYLGQFEDDRCNSRLLTLLAHYPPVHVVYERGNLSQRTLQ
IFNNNLAACIKESLLRESQFWSSSTTLKNLHEGDYFKKSNSEFQWPTGLQSYLNKSDSLG
LTPAEDKELAVHALGGCTYLLKEYLLEQQLLAQGRFKTYIPPDFSNKTFEASKFANNMVL
DAITINNLRIFGEGSLIKTLDRCCTAFGKRLLREWVCRPSCRKDVIIERQKAIQELMDHS
ETIQTARSILAGLPDLERLLSKIHAQGNPAKQNNHPDGRAIMFEGQTYSKKRIIDFITTL
NGFEDVLKVIALFEDFCSILISKCTKVEPDGEFPSLRESLDYFKTAFDHEEAKRVGCIVP
KKGVDSEYDAVLMELEEIKKDSEQYLEKQKKHFGVKVTFHGSDKKRYQIEIPDSQTKKVG
AGFELQSQRKGYKRYYTAESKELLSRQINAEEHRDKVLKDLNRRIFAQFSEKYDMWNMAV
YKLSVLDVLISLTEYALSGDMCVPEINDGTNEKIFIDIRDGRHPCIISDTFIPNDTLLAT
ENFASFMILTGPNMGGKSTLMRQVALLTIMAQIGSYVPASSCRLTLVDRIFTRLGANDDI
LAGQSTFLVELSETSAILQHATPYSLVLLDELGRGTSTYDGTAIAAAVVNALTKLNCRTL
FSTHYHSLVEDYKNDKKITLAHMACMVENEEQDEVSQETVTFLYKLSEGACPKSYGFNAA
RLGGVPAIITNRAHEISKKLEQETNRKHLFTTLCKANGSTIRDLIAAI
NT seq
3387 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgaatacattatataattattttacatcgcctaaaactcctaaaacacct
aaattaaataataaacaaatatctgatgaaaaatctacaacaccgaaaagagcaagaaga
caattgaacaaagctaaaactccaagtaaagggaaagaaaataagaatctcgaagataga
aaaagaatatacaaggatgatgaggaagaagaaaaggaagaaaatgaaccaattcaaata
aaaaagcgaagactaattattcctgatgaagaatctggagaagattctggagatgaattt
aagcctgatttagatgaggaatcagaagaatctgattcaggatctgaaggagttagtgaa
agtgaaccaccaactgcgagtgaagaagaaagtccagagaagaaacgaaagcttattaat
tctaatggaagaaaaccacaaaaaggtgcaaaaaaaaattttaaagaagataaaaaagaa
tcaaaacttcaacaacaaaatcaatcccaaggttcaaataatgttatagattcttggcca
catttaaaatatgattttcttcaaccaaataaaatacgagatattaataaaaaaccacta
agtgattcagattatgattctaaaactctatatgttcctttggattttttgaatcaacaa
actccagctatgagacagtggtgggaattgaaaagtaaacactttgattgtgttcttttc
tttaagttaggaaaattttacgaattatatcatatggatgctgtaattggcgttaatgaa
cttcatcttacttatatgagaggagaatttgcacattcgggatttcctgaaattggatat
ggccgtttctcagcgagtctcatagaaagaggatataaagtggcgagagtagaacaaaca
gagaatccagacatgatggcacaacgcgttagcaatatgattagaccaacaaaatttgat
aaagtagttaaaagagaaatttgccaaataacttctaaaggtacaagggtatacactccc
caagatatagaaccatctacaccgaattctaattatttattatcagtaattgaaaaatgt
tcatctggttctaatatatctcattatggagtttgtttcttagacactacaataggagat
ttctatctcggtcaatttgaagatgatcgatgtaattctagattattaactttactcgct
cattatcctccagttcatgttgtttatgaacgtggtaatttgtctcaaagaacgttacaa
atttttaacaacaatttagcagcatgtattaaagaatcgcttttacgcgaatctcaattt
tggtcatcttcaactacattaaaaaatcttcatgaaggagattattttaaaaaatcaaat
tctgagtttcaatggcctacaggcttacaatcatatcttaataaaagtgatagtttaggt
ttaactcctgctgaagataaagaactagcggtacatgctttaggtggatgtacatattta
ctcaaagaatatctgcttgaacaacaattattggcacaaggacgttttaaaacatatatt
cctccagatttttcaaataaaacatttgaagcttctaaatttgcaaataatatggtttta
gatgctatcacgattaataatttgagaattttcggggaaggttctcttataaaaacattg
gatcgttgttgtaccgcatttggaaagagattgttacgagaatgggtttgtagaccatct
tgccgaaaagatgttataattgaacgtcaaaaagctatacaagaattaatggatcattca
gaaacaatacaaacggctcgtagtatattagcggggcttcctgatcttgaaagattattg
agcaagattcatgctcaaggaaatccggcaaaacaaaataatcatcctgatggcagagct
atcatgtttgaggggcaaacatattcaaagaaaagaattatagattttattaccactttg
aatggttttgaagatgtcttaaaagtaattgctttgtttgaagatttctgtagtatctta
ataagcaaatgtactaaagtggaaccagatggtgaatttccttcattaagagaatcttta
gattattttaagactgcatttgaccatgaagaagccaaaagagtaggttgtattgttcca
aagaaaggagtcgattctgaatatgatgccgttttaatggaacttgaggaaataaaaaaa
gattcagaacaatatcttgaaaagcagaaaaaacactttggagtgaaagtcacgtttcac
ggatcggataaaaagcgttatcagatcgagattccagattctcaaacgaaaaaagttggt
gctggatttgaacttcaatcacaaaggaaaggatataaacgttattatactgcagagtca
aaggaacttttaagtcgacaaataaatgccgaagaacatagagataaagtattgaaggat
ttaaatagaagaatatttgcacaatttagcgaaaaatatgatatgtggaatatggcagtt
tataaattgtctgttttagatgttcttatttctttaacagaatacgctctcagtggtgat
atgtgtgtaccggaaattaatgatggtacaaatgaaaagatatttattgatattcgagat
ggacgacatccatgtattatttcagatacatttataccaaatgacactttactagcaact
gaaaatttcgcttctttcatgattctcactggaccaaatatgggcggtaaatcaacattg
atgcgtcaggttgcccttctcactataatggcacaaattggaagttatgttcctgcaagt
tcctgtcgtttaacactagtagatcgtattttcacaagattgggagcaaatgacgatatt
ttggctggtcaaagtacattcttagtagaattaagcgaaacttctgcaatattacaacat
gctacaccatattctctcgtattacttgatgaattaggacgtggtacatcgacgtatgat
ggtacggcaattgctgctgcagttgtaaatgcacttacaaaattaaactgtcgtacttta
ttctcaacgcattatcattctttggtagaagattataaaaatgataagaaaattacatta
gctcatatggcatgcatggtagaaaatgaggaacaagatgaagtatcccaagaaacagta
acatttttatacaaactcagcgaaggagcttgtccgaaatcgtatggtttcaacgctgcc
cgattaggtggtgttccagctataattacaaatagagcacatgagatttcaaaaaaactc
gaacaagaaacaaatcgaaaacacttatttactactttgtgtaaagcgaatggttcaact
ataagggatctaattgctgcaatttga
DBGET
integrated database retrieval system
