Apis florea (little honeybee): 100869086
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Entry
100869086 CDS
T09140
Name
(RefSeq) pre-mRNA-splicing factor syf1 homolog isoform X1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100869086
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100869086
03041 Spliceosome [BR:
aflr03041
]
100869086
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100869086
Spliceosome [BR:
aflr03041
]
Complex B
Other components
Prp19-related factors
100869086
Complex C
100869086
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_N
HAT_PRP39_C
TPR_14
Suf
TPR_2
TPR_8
TPR_12
TPR_15
ARM_TT21_C
DHR-2_Lobe_A
PPR
TPR_10
ARM_TT21
Microp_apicomplexa_6
4HB_MCP_1
Motif
Other DBs
NCBI-GeneID:
100869086
NCBI-ProteinID:
XP_003698726
LinkDB
All DBs
Position
Unknown
AA seq
837 aa
AA seq
DB search
MLERKDPEGNVYVFNEEDLPYEEEILRNPYSVKHWQRYIDHLKSTKSNNLNIVYERALKE
LPGSYKLWYNYLRQRVNQLKGRCITDLLYEDVNNAFERALVFMHKMPRIWMDYCTLMTEQ
CYITRTRQVFDRALRALPITQHHRIWPLYIEFLKKHNVYETAVRVFRRYLKLAPEDTEEY
IEYLRSIGRLDEAAVKLAQIVNQDDFISKHGKSNHQLWNELCDLISKNPSKIKSLNVDAI
IRGGLRRYTDQLGPLWNSLADYYVRSGLFERARDIYEEAIQTVTTVRDFTQVFDAYAQFE
ELSLSKRMEEAAKNPTEDDDIDLELRLARFEHLMERRLLLLNSVLLRQNPHNVQEWHKRV
RLYEGQPHEIINTYTEAVQTVQPQLAVGKLHTLWVEFGKFYEENNQIADARVVFEKATHV
PYTKVDDLASVWCEWAEMEIRHGNYKEALKLMHRATAMPFRKVAYHDETETVQMRLYKSL
KVWSMYADLEESFGTFKTCKAVYDKIIDLKIATPQIIINYGLFLEENKYFEEAFRAYEKG
IALFKWPNVYDIWNTYLTKFLKRYGGTKLERTRDLFEQCLEFCPPKYAKALYLLYAKLEE
EHGLARHAMSVYERATNAVLPEERFEMFNIYIKKAADIYGVPKTRQIYEKAIEVLNEDNT
REMCLRFAEMETKLGEVDRARAIYAHCSQICDPRVASNFWQIWKEFEVRHGNEDTMREML
RIKRSVQAMYNTQVNMMSAQMLNNTSNSISDVPTDAMRLLDSKTQDNITTYKDSIKFVRG
VTEKDGKPESQVNNPDEIDIDINDVNEGDIEEDIPIEKQTIPSQVFSSLKTTDDEDD
NT seq
2514 nt
NT seq
+upstream
nt +downstream
nt
atgttagaacgcaaagatccagaaggaaatgtatatgttttcaatgaggaagatttaccg
tacgaagaagaaattttaagaaatccatattctgtaaaacattggcaacgttatatagat
cacttaaaaagtacaaaaagcaataatttaaatattgtatatgaacgagcattgaaagaa
cttcctggaagttataaattatggtacaattatcttcgtcaacgtgtcaatcaactgaaa
ggaagatgcataactgatcttctttatgaagatgtaaataatgcatttgaacgtgcttta
gttttcatgcataaaatgcctagaatttggatggattattgtacattaatgacagaacaa
tgttatattacacgtactcgtcaagtttttgatagagcacttagagctcttcctattaca
caacatcatcgtatatggccattgtatattgaatttttgaaaaagcacaatgtatatgaa
actgctgtcagagtttttagacgatatttaaagttagctccagaagatacagaagaatat
atagaatacttgagatcaattggaaggctcgatgaagcagctgtaaaacttgcacaaatt
gttaatcaagatgattttatatcaaagcatggaaaatctaatcatcaattatggaatgaa
ttgtgtgatttaatatcaaaaaatccttctaaaataaaatctcttaatgtggatgctatt
attagaggtggattaagacgttatactgatcaattaggtcctttatggaattctttagca
gattattatgttcgtagtggtttatttgaaagggcgagagatatttatgaagaagcaata
caaacagtaactactgttagagactttactcaagtatttgatgcctatgcacaatttgaa
gaacttagtcttagtaagcgtatggaagaagctgcaaaaaatcctactgaagatgatgat
attgatttagaattgagattagcacgctttgaacatttaatggaaagacgtttattactt
ttgaattctgtattactcagacaaaatcctcataatgtacaagaatggcataaaagagtt
agactttatgaaggacaaccacacgaaattattaatacatatacagaagctgtacaaact
gtgcaaccacaattagcagtaggtaaattacatactttgtgggttgaatttggtaaattt
tatgaagaaaataatcaaatagcagatgctagagtagtttttgaaaaagcaactcatgtt
ccttatactaaagtagacgatctcgcttctgtatggtgtgaatgggcagaaatggaaatt
aggcatggaaattataaagaagcattaaaacttatgcatcgcgcgacagctatgccattc
cgcaaagtagcttatcatgacgagacagaaacggttcaaatgagattatacaaatctcta
aaagtttggtctatgtatgctgatttagaagaaagttttggaacatttaaaacatgcaaa
gctgtatatgacaaaattatagatctaaaaattgcaacaccacaaatcattattaattat
ggtctctttttggaagaaaataaatattttgaagaagctttcagagcttatgaaaaaggt
attgcactctttaaatggcctaacgtttatgatatatggaatacatatcttacaaaattt
ttaaagcgttatggtggaacaaaattagaacgaacgcgagatttatttgaacaatgttta
gaattttgtccaccaaaatatgctaaagctttatatttactgtatgcaaaattagaagag
gaacatggtttagctagacatgcaatgtctgtatatgaacgagcaacaaatgctgttctt
cctgaagaaagatttgagatgttcaatatatatataaaaaaagcagcagatatatacggt
gtaccaaaaacaagacagatatatgaaaaagctattgaagtacttaatgaagataataca
agagaaatgtgtttaagatttgcagaaatggaaacaaaattaggagaagttgatagagct
cgggcaatatatgctcattgcagtcaaatttgtgatccaagagtagcatcaaatttttgg
caaatatggaaagaatttgaagtaagacatggtaatgaagatactatgcgtgaaatgctt
cgaattaaacgtagtgttcaagctatgtacaacactcaagtaaatatgatgtctgcacaa
atgttgaataatacatcgaattcaatatcagatgtaccaacagatgcaatgcgtcttttg
gatagtaaaacacaggataatattactacatataaggatagtattaaatttgttcgtggt
gtgacagaaaaagacggtaaaccggaatctcaagtaaataatccggatgaaatagatatt
gatattaatgatgttaatgaaggagatatagaagaagatatacctattgaaaaacaaact
attccgtcacaagtgttcagtagtttaaaaacaactgatgatgaagatgattaa
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