Apis florea (little honeybee): 100869239
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Entry
100869239 CDS
T09140
Name
(RefSeq) DNA mismatch repair protein Msh2 isoform X1
KO
K08735
DNA mismatch repair protein MSH2
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
100869239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
aflr03400
]
100869239
DNA repair and recombination proteins [BR:
aflr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
100869239
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_II
MutS_I
AAA_27
Motif
Other DBs
NCBI-GeneID:
100869239
NCBI-ProteinID:
XP_012346952
LinkDB
All DBs
Position
Unknown
AA seq
884 aa
AA seq
DB search
MAVQPNQQFNMDPSSQQSFVRFFKSLPEKLNTTVRFFNRSDYYTLHGNDALFAAQEIFKT
TSVCKMIGADPYKTEGVILNKNHFESFIRDLLLVKQYRVEVYINQGTAKNQNWILEYKGS
PGNLTQFEDILFGSNDIAVSVRVIAVKLGMEGKFRIVGLSCVDTTATLFSVCEFQDNESF
SNLESLIVTLAPKECLLIQGEGSYEFQTLKQLIERNNVMVTTRKKNEFSSESVIQDLNTL
IRFKKGQQQNVQSLPEVNLTFAMSATSALIKYLDLTSDEGNLNQFSIDQIKQSRFLKLDS
AAIKALNIEPRVDTSVLNGNAPTSILNLLDKCRTPQGHRLLAQWIRQPLKDLSLIKERHD
IVEALVNDNELRSNLNEDHLRRIPDLQVLAKKLARKKATLQDCYKIYTCISHLPILLEQF
PKINIIALKTMFTDPLNEFIKDMNKFQQMVEQTIDLDSAEKGDFLVRSEFDDELKELKCT
MDEIEIKLQAQLNKVADDLSIEAGKILKLESNQQFGYYFRVTLKEEKVLRNKKQYIILDS
NKSGVRFRSNKLNDLNDEYIAIRDKYIMEQKKVVAEIIEIAAGYSNTIKAIGNVLASLDV
LTAFASAAVCANKPYVRPEMLPSEKGEFNLIQVRHPCLEVQEGVDYIANNINFKRGECHF
CIITGPNMGGKSTYIRSAGVSALMAHIGSFVPCDQARISLLDCILARVGADDCQLKGLST
FMMEMIETAAILKTATCNSLVLIDELGRGTSTYEGCGIAWSIAEYLAKEIKCYCLFATHF
HEITKLEEEISTVKNQHVTALVDDNKLTLLYKIKPGICDQSFGIHVAKMANFPQDIIEFA
KRKQAELEDYQDSLFEGSDNPTKKKRLSRKLKSLLQNLLINARI
NT seq
2655 nt
NT seq
+upstream
nt +downstream
nt
atggctgtccaaccaaatcaacaatttaatatggatccatcaagtcaacaaagttttgta
aggttttttaagagtctaccagaaaaactgaataccacagtacgtttttttaatagatca
gattattatacattacatggtaatgatgctttatttgctgcacaagaaatttttaaaact
acatctgtttgtaaaatgataggtgcagatccatataaaactgagggagttattcttaac
aaaaatcattttgaatcttttatacgtgatctattattagtaaaacaatacagagtagaa
gtttatattaatcaaggaactgcaaaaaaccaaaattggatattagaatataaaggatct
cctggtaatttaacacagtttgaggatatactgtttggcagtaatgatattgctgttagt
gttcgtgttatagcagtaaaattaggaatggaaggaaaatttagaattgtaggtttaagt
tgtgtagatactacagcaactttattttctgtttgtgaatttcaagacaatgaatcattt
tctaatttggaatcattgattgttacacttgctcctaaagaatgtttattaattcaaggt
gaaggcagctatgaatttcaaactttaaaacaactaatagaacgaaataatgtaatggtt
actacaagaaaaaaaaatgaattctctagtgaatcagttatacaagatttaaatacttta
ataagattcaagaaaggtcaacaacaaaatgtacaatctttacctgaagtcaatttaact
tttgctatgtcagctacttctgctcttatcaaatatttagatttaacatcagacgaagga
aacttgaatcagtttagtatagatcaaataaagcaatcacgttttttgaaattagattca
gctgctataaaagcacttaatattgaaccacgtgttgatacttctgttttaaatggaaat
gcacctacaagtattttgaatctcttagataaatgtagaactccacaaggacatagactt
cttgcacaatggattagacaacctttaaaagatttatcacttataaaagaaagacatgat
attgttgaagcattagtgaatgataatgaattacgatctaatcttaatgaagatcattta
agacgcataccagatttacaagtacttgcaaaaaaattggctagaaaaaaagcaacttta
caggattgctataagatttatacatgtatatcacatttacctatattattagaacaattt
cctaaaataaatataatagccttaaaaacaatgtttactgatcctttaaatgaatttatt
aaagatatgaataaatttcaacaaatggttgaacaaacaattgatttagattctgctgaa
aaaggagattttttagtacgatctgaatttgatgatgaattaaaagaattgaaatgtact
atggatgaaatagagataaaattgcaagcacaattgaataaagttgctgatgatctttca
atcgaagctggaaaaatactaaaactagaatcaaatcaacaatttggatattatttccgt
gtaacattgaaggaagaaaaagttttaagaaataaaaaacaatatattattttagattct
aataaaagtggtgtacgatttcgaagtaataaattaaatgatttaaatgatgagtacatt
gctattagagataaatatataatggaacaaaaaaaagttgttgcggaaataattgaaatt
gcagctggttatagtaatacaataaaagctattggaaatgtattagcatcacttgatgta
cttactgcttttgcttctgctgctgtatgtgctaataaaccatatgtacgtcctgaaatg
ctccctagtgaaaaaggagaatttaatcttattcaagttcgacatccatgtttagaagtt
caagaaggagtagattatatagctaataatatcaattttaaaagaggagaatgtcatttt
tgtattattactggtccaaatatgggaggtaaaagcacatatataagatccgctggtgtt
agtgctctcatggcacatattggaagttttgttccttgtgatcaagcaagaatatcatta
ttagactgtatattagctcgtgtaggagctgatgattgtcaattgaaaggactttctaca
tttatgatggaaatgatagaaactgctgctatattaaagacagcaacatgcaattcattg
gtgttgattgatgaattaggcagaggaacttctacttatgaaggttgcggtatagcatgg
tcaatcgccgaatatttagcaaaagaaattaaatgttattgcctttttgcaacacatttt
catgaaataactaaattagaagaagaaatatctactgttaaaaatcaacatgttacagct
cttgtagatgataataaattaactttactatataaaataaaaccaggaatatgtgatcaa
agttttggcatacatgttgctaaaatggctaatttcccacaagatattattgagtttgct
aaacgtaaacaagcagaacttgaagattatcaagattcactttttgagggatctgataat
ccaacaaaaaaaaaaagattatccaggaagctgaaatccttattgcagaatttattgata
aatgcaagaatttag
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