Apis florea (little honeybee): 100869259
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Entry
100869259 CDS
T09140
Name
(RefSeq) general transcription and DNA repair factor IIH helicase subunit XPB isoform X1
KO
K10843
DNA excision repair protein ERCC-3 [EC:
5.6.2.4
]
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03022
Basal transcription factors
aflr03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
100869259
09124 Replication and repair
03420 Nucleotide excision repair
100869259
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aflr03021
]
100869259
03400 DNA repair and recombination proteins [BR:
aflr03400
]
100869259
Enzymes [BR:
aflr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
100869259
Transcription machinery [BR:
aflr03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
100869259
DNA repair and recombination proteins [BR:
aflr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
100869259
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ERCC3_RAD25_C
Helicase_C_3
ResIII
Helicase_C
DEAD
SNF2-rel_dom
AAA_34
SWI2_SNF2
TniB
Motif
Other DBs
NCBI-GeneID:
100869259
NCBI-ProteinID:
XP_003691832
LinkDB
All DBs
Position
Unknown
AA seq
795 aa
AA seq
DB search
MGPPKRFKKDNDRGKWKKRKEDPEEYNEDDTLDDNETEGIPDAAKNDVEKQDDTALEDEF
GAKDYRSQMILKPDCALRPLWVAPNGHIFLESFSPVYKHAHDFLIAISEPVCRPEHIHEY
KLTAYSLYAAVSVGLQTHDIIEYLKRLSKTSIPDGIIEFIKLCTLSYGKVKLVLKHNKYF
VESPYPEVLQRLLKDPVIQECRLKKNIEDDKDEIITNVQNKTKTPQFGAKAITNVPTGTT
KVTEPTNDQVPAETAAVPEDITTFYDKIDKEDEDEEEEHELKTVSFEVNQEKIEVIQKRC
IELEYPLLAEYDFRNDTINPDINIDLKPSAVLRPYQEKSLRKMFGNGRARSGVIVLPCGA
GKSLVGVTACCTVRKRALVLCNSGVSVEQWKQQFKMWSTADDSMICRFTSEAKDKPMGCG
ILITTYSMITHTQKRSWEAEQTMRWLQEQEWGIMVLDEVHTIPAKMFRRVLTIVQSHCKL
GLTATLLREDDKIADLNFLIGPKLYEANWLELQKRGFIARVQCAEVWCPMTPEFYREYLG
CKMSKKLLLYVMNPNKFRCCQYLIRYHERRGDKTIVFSDNVFALKHYAIKMNKPYIYGPT
SQSERIQILQNFKFNTKVNTIFVSKVADTSFDLPEANVLIQISSHGGSRRQEAQRLGRIL
RAKKGAIAEEYNAFFYTLVSQDTMEMNYSRKRQRFLVNQGYAYKVITKLAGMEEEPDLMY
TSREEQGHLLQQVLSASDMDADEERIPGEGPRPIVRKAGNMTSMSGADDAVYYEYKKAPS
SSTANKHPLFKKFRA
NT seq
2388 nt
NT seq
+upstream
nt +downstream
nt
atgggtcctccaaaacgtttcaaaaaagacaatgacagaggtaaatggaaaaaacgtaaa
gaagatccagaagaatacaatgaagatgatactttagatgataatgaaactgaaggtata
cctgatgcagccaagaatgatgttgaaaaacaagatgatacagcattggaagatgaattt
ggtgcaaaagattatcgttcacaaatgattttaaaacctgattgtgctttaagaccactt
tgggtggcaccaaatggacatatttttttggaatctttttcacctgtatataaacatgct
catgattttttaattgctatctcagaacctgtgtgtcgtccagaacatattcatgaatat
aaattaactgcttattctttatatgctgctgtaagtgttggtcttcaaacacatgatata
atagaatatttaaaaagacttagtaaaaccagcattcctgatgggattatagaatttatt
aaattatgtacattgtcatatggtaaagtgaagttagtattaaaacacaataagtatttt
gttgaatctccatatccagaagtattacaaagattactgaaagatcctgtaattcaagaa
tgtagattaaagaaaaatatagaagatgataaagatgaaataattacaaatgttcaaaat
aaaacaaaaacaccacagtttggagcaaaagccataactaatgttcctactggaactacc
aaagtaacagaaccaactaatgatcaagttccagcagaaacagctgctgttcctgaagat
ataactactttttatgataaaatagataaagaggatgaagatgaagaagaagagcatgaa
ttaaaaacagttagttttgaagtaaatcaggaaaaaattgaagttatacaaaaaagatgt
attgaattggaatatcctttgttagcagaatatgatttccgtaatgatactataaatcca
gatataaacattgatttaaaaccatcagctgtactgagaccctatcaggagaagagttta
agaaaaatgtttggaaatggacgagctagatcgggagttatagtcttaccttgtggtgct
ggcaaaagtttagttggagtaacagcttgttgtacagttcgaaaacgtgcattagtatta
tgtaattctggagtgtcggtagaacaatggaaacagcaatttaaaatgtggtctactgca
gatgattcaatgatttgtcgatttacgagtgaagcgaaagataaacctatgggttgtgga
attttaattacaacatattctatgattactcatactcagaaacgttcatgggaagcggaa
caaactatgcgatggcttcaagaacaagaatggggaattatggttttagatgaggtacat
acaattcctgcaaaaatgtttagaagggtcttaacaattgttcaatctcattgtaaattg
ggattgaccgcgacattacttcgagaagatgacaaaattgctgatcttaattttttgatt
ggacctaaactatatgaggccaactggttagaattacaaaaaaggggttttattgcaaga
gtacaatgtgccgaagtttggtgtcctatgacacctgaattttatagagaatatcttggt
tgtaaaatgagtaaaaaattattactttatgtaatgaatcctaataaatttcgttgctgt
caatatttgataagatatcatgaaagacgtggcgataaaaccattgttttctcggataac
gtttttgctttgaagcattatgctattaaaatgaataaaccgtatatctatgggcctact
agtcaaagtgaacggatacaaattttgcaaaactttaaattcaatactaaagtgaacact
atatttgtcagtaaagtggctgatacttcttttgatttaccagaagctaatgtattgatt
caaatatcttcacatggtggttcacggcgtcaagaagcacaacgtttaggacgaattttg
agagctaaaaaaggtgccattgcggaggaatataatgcatttttttatacgttagtatcg
caagatacaatggaaatgaattactcgcgaaaacgccaacgtttccttgtcaatcaaggt
tatgcttataaagtcattacaaaacttgcaggaatggaagaggagccagatttaatgtat
acatctcgagaagaacagggacatttgttacaacaagtcttatctgccagtgatatggat
gcagatgaagaaagaataccaggagaaggtccaagacctattgtacgtaaagctggaaac
atgacatcaatgtctggtgcagatgatgcagtttattatgaatataaaaaagctcctagt
tcatctacagcaaacaaacatccattatttaaaaaatttagagcatag
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integrated database retrieval system
