Apis florea (little honeybee): 100870697
Help
Entry
100870697 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: transcription elongation factor SPT6
KO
K11292
transcription elongation factor SPT6
Organism
aflr
Apis florea (little honeybee)
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
aflr03021
]
100870697
03036 Chromosome and associated proteins [BR:
aflr03036
]
100870697
Transcription machinery [BR:
aflr03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
100870697
Chromosome and associated proteins [BR:
aflr03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
Other Histone chaperones and regulators
100870697
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SH2_2
HHH_7
YqgF
HTH_44
SPT6_acidic
S1
SH2
HHH_3
Tex_YqgF
HHH_9
Spt6_S1
HTH_10
S1_RRP5
Tex_N
OB_RRP5_4th
Motif
Other DBs
NCBI-GeneID:
100870697
NCBI-ProteinID:
XP_012341343
LinkDB
All DBs
Position
Unknown
AA seq
1769 aa
AA seq
DB search
MADFLDSEAEESEEEEELDDNEKKKLKKIKAVAESDEEEEEDDEDRLREELKDLIDDNPI
EESEGEDSDASGASKKRKKSDDEDFDDRLEDEDYDLIEENLGVKVERKRFKRLRRIQDEE
SEEEQEKEVDDDRDAIANELFEGSGDEREITMEDERRSERSHRPEVDTFDEEGSEGEYTD
ADDFIVDDDGRPIAEKRKKKKPIFSDAALQEAQDIFGVDFDYDEFGKYGEEDYEEDEEEE
EEEEDEYMDDEDTERPRRPKKQLKKKTTRKSIFEIYEPSELKRGHFTDMDNEIRNTDIPE
RMQLRTIPVTPVAEGSDELDLEAEWIYKQAFCRPTISIQDAHLNAEAKERARKGPQTIGK
IKKALDFMRNQQFEVPFISFYRKEYVLPELNINDLWKVYKFDAKWCQLRQRKENLLKLFD
KMRNYQLDEIMKNPDAPLPDNIRLIKDDDIERLKNVQTSEELNDVYYHFMLYYSHEIPTM
QEAARQKEKKARKEAKIQKRKQQIAGAEENGEDPPEEEVDVEEEEEADETLKQAVRTGPY
SICRRAGLDSLAKKFGLTPEHFAENLRDNYQRHEVDQEPTEPLIIANEYCSQILNNPEEV
LKAVQLMVAIQLAREPLVKRCVREMYMERAKISVKPTKKGIKEIDENHPIYGMKYLKNKP
VRDLVGDQFLNLIIAEEDKLITITLSDSIEGNTSNNYVDEMKQLYYRDEFSKNVQDWNAL
RVGSVEIALTRIVLPSLKKELRANLIAEAKECVMRACCRKMYNWIKVAPYICEFPEEEDE
EWDTTKGLRVMGLAYVPDYSQAAFACLIAPDGECTDYLRLPHLMKRKNSYREDEKTMKEA
DLLAIRNFIATKKPHVIVIGGESREAMMIAADIKECIANLVEEEQFPNIKIEICDNELAK
IYSNSNKGISEFRDYPELLRQAISLGRRMQDPLVEFSQLCTADEEILCLKYHSLQDQLPK
DELLDNLYLEFVNRVNEVGVDVNKAVQQAYCGNLVQFVCGLGPRKGQALIKMLKQTNQRL
ENRTQLVTACHMGPKVFINCAGFIKIDTNSLGDSTEAYVEVLDGSRVHPETYEWARKMAV
DALEYDDEDANPAGALEEILESPERLKDLDLDAFAEELERQGFGNKCVTLYDIRAELNCR
YKDLRVPYQSPSAERLFDILTKETPETFYVGKLVLATVIGISHRKPQGDQLDQANPVRND
ETGLWQCPFCXKNDFPELSEVWNHFDAGACPGKATGIRLRLDNGISGYIHIKNLSDRHVA
NPEERVSIGQIIHCRIIKIEVERFSVECTSKSSDLADKNHEWRPQRDPFYDTETEQRDAK
VEEDAKKAKQRQTYVKRVIVHPSFHNISFAEAEKLMQTMKQGEAIVRPSSKGADHLTVTW
KVTDEVYQHIDVREEGKENAFSLGQSLWIGNEEFEDLDEIIARHVNPMAAYASELLDFKY
YKATVEGIKDKAEDILKEQKKENPGGIPYIISAAKNYPGKFLLSYLPRTRCRHEYVTVSP
EGFRFRGQMFGRVNDLFRWFKEHFRDPVPGQSTPSTPRGAMTSRTPYHTTPGAVSGMNQE
AIQRVAQNLPHHMLHSLSQVANQTPHHYPPHTPGTTSAAGYAGVHTYPNTPYTPSGQTPF
MTPYQTPHHTPHHHGQPTPRYGQQTPNHQQGPFIHPPPPSGISGHHRSTPSHRPTPPMST
PGDPMDWKKAAEAWARLKSGPRVSTSTPRYEESRKTPRNYEESVGRTTPRNRTSNRTPSY
KSPRGTPHTNSSPRSMSLSGDGTPLYDES
NT seq
5310 nt
NT seq
+upstream
nt +downstream
nt
atggccgattttttagattcagaagcagaagaaagcgaggaggaagaggaattagacgat
aatgaaaagaaaaaattgaagaaaataaaagctgtggcagaaagtgatgaagaagaggag
gaagatgatgaagatcgtttacgtgaagaacttaaagatctcattgatgataatcctata
gaagaaagtgaaggagaagacagtgatgcttctggagcatccaaaaaacgtaaaaagagt
gatgatgaagattttgatgatcgtttagaagatgaagattatgatttgatagaagagaat
ttgggagttaaagttgaaagaaaacgtttcaaacgccttcgtaggattcaagatgaagaa
tcagaggaagaacaagaaaaggaagtggatgatgatagagatgctattgcaaatgaactt
tttgaaggctctggtgatgaaagagagattactatggaagatgagaggagaagtgaacgc
agtcatagacctgaggtggatacatttgatgaagaaggaagcgaaggagaatataccgat
gcggatgattttatcgttgacgacgatggtaggccaattgcagaaaaacgaaagaagaaa
aaaccaatattttctgatgcagcattacaagaagcacaagatatttttggtgttgatttt
gattatgatgaatttggtaaatatggtgaagaagattatgaggaagatgaagaagaagaa
gaagaagaggaagatgaatatatggatgatgaagataccgaaagaccacgaagaccgaaa
aaacaactgaaaaagaaaacaacgagaaaaagtatatttgaaatttatgaaccgagcgaa
cttaaacgtggtcatttcaccgatatggataatgaaatacgaaatacagatataccggaa
agaatgcaacttcgtactattcctgttactccagttgcggagggttccgatgagttagat
ctagaggcagaatggatttataaacaagctttttgtcgaccaactatttcaattcaagat
gcacatttaaatgccgaagctaaagaaagggctcgaaaggggcctcaaacgatcggtaaa
attaaaaaagctttggatttcatgcgaaatcaacaatttgaggtgccttttatatcattt
tatagaaaggaatatgttttaccggaattaaacattaacgatctttggaaagtatataag
tttgatgcgaaatggtgtcaacttcgtcaaagaaaagaaaatttattaaaattattcgat
aaaatgagaaattatcaattagacgaaattatgaaaaatcctgatgctcctttaccagat
aacatacgattgattaaagatgatgacatagaacgattgaaaaacgtacaaactagcgaa
gaattaaacgatgtttattatcacttcatgttatattatagtcatgaaattccaacgatg
caagaagctgctcgtcagaaagagaaaaaagcacgcaaggaagccaagattcaaaaacga
aaacagcaaattgctggcgccgaagaaaatggagaagatcctccagaagaagaagtagat
gtagaagaagaagaggaagcggatgaaacattgaaacaagctgttcgaactggtccgtat
tctatttgtaggcgagctggccttgatagtcttgcaaaaaaatttggtcttactcccgaa
cattttgctgaaaatttgcgagataattatcaacgacatgaagtggatcaagaaccaact
gaaccattaatcattgctaatgaatattgtagtcaaatacttaataatccagaagaagta
ttaaaagctgttcaattaatggtagctattcaattagcgcgcgaacctttggtaaaaaga
tgcgtccgagaaatgtatatggaaagagcaaaaatatcagtaaaacccacgaaaaaagga
attaaagagatagatgaaaatcatccaatatacgggatgaaatatctgaagaataaacca
gtgcgagatttagtcggagatcagtttttaaatttaatcatagctgaagaagataaatta
atcacgataactttaagcgatagcatcgaaggaaataccagtaacaattacgttgatgaa
atgaaacagctttattatcgagacgaattcagtaaaaatgttcaagactggaatgcattg
agagttggaagtgtcgaaatagctcttacacgtatagttctaccaagtttgaaaaaagaa
ttaagagcaaatcttattgcggaagctaaagaatgcgtaatgagagcatgttgtcgtaaa
atgtacaattggatcaaagttgcgccttatatctgtgaatttccagaggaagaagatgag
gaatgggatactacgaaaggacttcgagttatgggtttagcttatgttccagattattct
caagccgcgtttgcttgtctaattgcacctgatggagaatgcacggactatttaagatta
ccacatttgatgaaacggaaaaatagttaccgagaagatgaaaaaaccatgaaggaagct
gacttgttagcaatcagaaattttatagcgacaaaaaaaccacatgttatagtaataggc
ggtgaatcgagagaagcaatgatgatcgctgctgacattaaggaatgcattgcaaatcta
gtagaagaagaacaatttccaaacattaagatagaaatttgtgacaatgaattagctaaa
atctactcaaacagtaataaaggtatatccgaatttcgggattatccggaattattgcga
caagctatttcactaggtagaagaatgcaagatcctttggtagaattttctcaattatgc
actgctgatgaagaaattttatgtttaaagtatcacagtttacaagatcaattgccaaaa
gatgaacttttggataacttatatttagaatttgtgaatcgcgtaaacgaagtcggtgtt
gatgtgaataaggcggtacaacaagcttattgcggaaatttagttcaattcgtgtgcggt
ttggggccaagaaaaggacaggcattgatcaaaatgttaaagcaaactaatcaaagatta
gaaaatagaacgcaattggtaactgcttgtcacatgggacctaaagtttttattaactgt
gcgggttttattaaaatagatacgaacagtttaggagacagcactgaagcttatgtagaa
gttcttgatggatctcgagtacatcccgaaacatatgaatgggcaagaaaaatggcagtc
gatgctttggaatacgatgacgaagatgctaatcctgctggagcactcgaagagattctt
gaatctcctgagagattgaaagatcttgacctggatgcatttgcggaagaactcgagaga
caaggtttcggcaataaatgcgttacattatacgatatcagagcagaattaaattgcagg
tataaagatttacgtgtaccatatcagtcgccaagcgcagaacgattattcgatatttta
acgaaagaaactccagaaacattttatgtgggaaaattagtattggctacggtgatagga
ataagtcatagaaaaccacagggtgatcaattagatcaagctaatcctgtaagaaatgat
gaaactggattatggcaatgcccattttgtntgaaaaatgattttcctgaactgtctgaa
gtatggaatcattttgatgccggagcttgtcctggcaaagctactggaattagattaaga
ttagataatggaatatctggttatattcacataaaaaatttatctgatagacatgttgcg
aatcccgaagaaagagtaagcataggacaaataatacattgtcgaataataaagattgaa
gtggagcgatttagcgttgaatgtacgagtaaaagcagtgacctcgcggataaaaatcat
gaatggagaccacaaagagatccattttacgacacggaaacagaacaaagagatgcaaaa
gttgaagaagatgcaaaaaaagcgaagcaacgtcaaacatatgtaaaacgcgtaatcgtg
catccttcttttcacaatattagttttgcagaagctgaaaaattaatgcaaacaatgaaa
caaggagaagctatagttagaccaagcagcaaaggtgccgatcacttaacagtcacatgg
aaagttacggatgaagtgtatcaacatattgatgtaagagaagaaggaaaagaaaatgct
ttttctcttggtcaaagtctgtggattggaaatgaagaattcgaagatttagatgaaatt
attgcaagacatgtaaatcctatggctgcatatgcttcagaattattggattttaaatat
tataaagcaactgtagaaggtattaaagataaagcagaagatatattgaaagaacagaaa
aaagaaaatcctggaggaattccatacataatatctgccgcaaagaattatcctgggaaa
tttttattatcttatcttccacgaactcgatgtcgtcatgaatatgtgacagtatcacca
gaaggatttagattcagaggacaaatgtttggtagagtaaacgatttgtttcgatggttc
aaggaacattttcgagatccagtacctggacaatctacacctagtactccacgtggcgca
atgacatctagaacaccttatcatacaacaccaggagcagtgagtggaatgaatcaagaa
gctatacaaagagtggctcaaaatcttcctcatcatatgttacattctttatcacaagtt
gcaaatcaaactccacatcattatccaccgcacacaccaggaactacaagtgccgctggt
tatgctggggttcatacttatcctaatacaccatatacaccttctggacaaacgcctttc
atgacaccatatcaaacaccacatcatactccacatcatcatggtcaaccaactccaaga
tatgggcaacaaacacccaatcatcaacaaggtccttttattcatccacctccaccttcg
gggataagtggacatcacagatcaacaccatcgcatagacctacgccacctatgtcaaca
cctggcgatcctatggattggaaaaaagcagcagaagcatgggcacgattaaaaagcggt
ccacgtgtatctacttctactccaagatacgaagaatctagaaagactcctagaaattat
gaagagtcggttggaagaacaactccacgaaatagaacttcgaatcggacaccttcgtat
aaatctcctcgaggtactcctcataccaattctagtcctcgaagtatgtctcttagcgga
gatggtactcctttatatgatgaaagttaa
DBGET
integrated database retrieval system
