Apis florea (little honeybee): 100870926
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Entry
100870926 CDS
T09140
Name
(RefSeq) regulator of nonsense transcripts 2
KO
K14327
regulator of nonsense transcripts 2
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03013
Nucleocytoplasmic transport
aflr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100870926
03015 mRNA surveillance pathway
100870926
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100870926
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100870926
mRNA cycle factors
P-body specific factors
100870926
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G
Upf2
Motif
Other DBs
NCBI-GeneID:
100870926
NCBI-ProteinID:
XP_003697689
LinkDB
All DBs
Position
Unknown
AA seq
1149 aa
AA seq
DB search
MSEVEEAAPETAEVISEQDAVSEEDKQYLTDYIKETEQRLNAKEEIRAANLNPNRPPETY
FSKLDSTLKRNTTFVKKLKNFSSTQLDTVLKDMTHLNLTKYVSEVATALVDAKLKMTDVA
PAIKVCSFLHQTYAEFSTHFFENWQRILSLKVVDKITNPSKLRVDLRFYAELVNAGIFTH
KQGLPLLGSALTVLINMDKEEHNNASIILSFCKHCGEDYAGLVPKKVREISEKLSTTIPK
SKLLSPDKQQNVRLLLRDYYNSLCKHLLKEHKDLQAFEKQNRKILQTRGELSSERKEKLE
SLQVSYDRLLNNVQSFSDTLDEPMPELPIDSEMKAEAEESLKMISEGEENSILEDMWGDE
ETRRFYEVLPDLTVFLPGSYLKEVPKQDVPISEEALDEEITFDELEETEKVDEPEAEVEE
PQVSNISNKILLDAFITHLPNCVNRELIDNAAVHFLMNLNTKHNKKKLVKALFGVSRIRL
DLLPFYSRLAAILYPVMSDVGNDLCSMLKHDFKYHVRKKDQINIESKVKVVRYIGELVKF
KLYSKIEALYCLKVLLHDFTHHHIEMACNLLETCGRYLFCSPDSHQRTKVYLEQMMRKKA
VTALDSRYVTIIENAYYYVNPPESTGGVSKKDRPPIHEFIRKLLYQDLSKTNTDKVLKWM
RKLDWEDESVSSYAIKCLTAAYNVKYLNIRCVGSLLAGLVAHYETIGPHVVDGVLEDIRL
CMEINLPKFNQRRIAMVKYLGELYNYRMVESGDIFRTLYLLITFGVSMDHSIPSILDPPD
HLFRIRLVCTLLETCGQYFSGGSSKKKLDYFLIFFQNYYWFKYTDPIWTSENPFPVGIDY
MYRDTLTMLRPKMQLFQSYKEAQCAVEELRNTLYPTLGNPIAEDGTERTDVESDMSVIAE
GDEDIAVTSGNGSGDAKGVADLHFEESEDCSEAQSEEDWTADAERDYTMGTQENTQGDQS
LSEGGTDGVIMDVTELNAALPAGPRRVSCPEDDDFLSALDKMVSDNIQDRMRDSVKPQQV
DISVPLHVKSTKKTYEQLQERPSDNSTVDFVLMLRKGNKQQYKNLAVPVSSELAMNLRNR
EQEQKEEKERVKRLTLNITERQEEEDYQETINQSTKPVTVNLNRERRQKYNHPKGAPDAD
LIFGPKKIR
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgtcagaagttgaagaagcagcaccagaaacagcagaagtaatttcggaacaagatgct
gtatctgaagaagataaacaatatttgactgattatataaaagaaacagaacaacgactg
aatgcaaaagaagaaatacgagcagccaatttaaatcctaatagaccacctgaaacatac
tttagcaaattagattcaacattgaaaagaaataccacatttgtcaaaaaattaaaaaat
tttagtagtacacagttagatacagttttaaaagatatgacacatttaaatttgacaaaa
tatgtaagtgaagttgctactgctttggtggatgctaaattaaaaatgacagatgttgca
cctgctattaaagtatgcagtttcttacaccagacatatgcagaattttcaactcatttt
tttgaaaattggcaaagaattttatctctaaaagttgtggataaaattacgaatccaagc
aaacttagagtagatcttcgattttatgctgaactagttaatgcaggaatttttacccat
aagcaaggattacctttgcttggttctgcattaactgttttaattaatatggataaagaa
gaacataataatgcaagtattatattaagtttttgtaaacattgtggagaagattatgca
ggtcttgtacccaaaaaagtaagggaaatatctgaaaagttaagtacaaccatacctaaa
agcaaattactttctcctgataaacaacaaaatgttagattattattacgagactattat
aattcattatgtaagcatttattaaaagaacataaagatcttcaagcatttgaaaaacaa
aatagaaaaattttacaaactagaggtgaactaagctctgaaagaaaagaaaaacttgaa
agtcttcaagtatcttatgatcgtttacttaataatgtacaaagtttttctgatacttta
gatgaacccatgccagaactccctatagatagtgaaatgaaagcagaagcagaagaatca
ttgaaaatgattagtgaaggagaagaaaatagcattctagaagatatgtggggagatgaa
gaaaccagacgattttatgaagttttaccagatttaacagtttttcttccaggatcatat
ttgaaagaagtacctaaacaagatgttccaataagtgaagaagctttagatgaggaaata
acatttgatgaactagaagaaactgaaaaagtagatgaacctgaagcagaagtggaagaa
ccacaggtttcaaatataagtaataaaatacttttagatgcatttataacacatttacca
aattgtgtaaatcgtgaattaattgataatgcagcagtacatttcttaatgaatctgaac
acaaaacataacaaaaaaaagttagtgaaggcattgtttggtgtttctagaattcgttta
gatctattaccattttattcacgattagcggctattctttatcctgttatgtctgatgta
ggaaatgatttatgttcaatgttaaaacatgattttaaatatcatgtacgcaaaaaggat
caaatcaatattgaatcaaaagtaaaagttgttagatacattggtgagcttgttaaattt
aaactttattccaaaatagaagctttatattgcttaaaagttttgttacacgattttacg
catcatcatattgaaatggcatgtaatttattagaaacatgtggaagatacttattttgt
tcaccagattcacatcaaagaacaaaagtatatttagaacaaatgatgcgtaaaaaggca
gttactgcactagattcacgttatgtaacaataattgagaatgcatattattatgtaaat
ccaccagaatctacaggaggtgtatctaaaaaagatagacctcctattcacgaattcata
agaaaattattatatcaagatctttcaaaaacaaatactgataaagttcttaaatggatg
cgcaaattagactgggaagatgaaagtgtatcatcttatgctattaaatgtctcactgcc
gcatataatgttaaatatttaaatattcgatgtgtaggaagtttattagctggacttgtt
gcacattatgaaactataggccctcatgtagtagatggtgtattagaagatataagacta
tgcatggaaataaatttaccaaaatttaatcaacgccgcattgctatggttaaatatctc
ggagaattgtataattatcgtatggtagaaagtggagatatttttcggacgttatatctt
ttgattacatttggagttagcatggatcattccataccaagtattttagatccacctgat
catctttttagaattcgattagtttgtacattattagaaacttgtggacagtattttagt
ggtgggtctagcaagaaaaaacttgattatttcttaatattctttcaaaattactattgg
tttaaatatacagatcctatttggacttcagaaaatccatttccagtgggtatagattat
atgtatcgtgatacattaacaatgttgagacccaaaatgcaattgtttcaaagttataaa
gaagcacaatgtgctgtagaagaattacgaaatacattatatcctactcttggaaatcct
attgcagaagatggtactgaacgtactgatgtagaatctgatatgagtgtaattgctgaa
ggagatgaagacatagctgtaacatctggaaatggtagtggagatgcaaaaggtgtggct
gatttacattttgaagaatctgaagattgttctgaagcacaatcagaagaagattggact
gctgatgcagaaagagattacactatgggtacacaagaaaatacccaaggagatcaaagt
ctttcagaaggtggtactgatggtgttattatggatgtcacagaattaaatgcagcatta
ccagctggtcctagaagagtaagttgtcctgaagatgatgattttttgtctgctcttgat
aagatggtttcagataatatacaagatagaatgcgagattcagtaaaaccacaacaagta
gatatttcagttcctttacatgtaaaaagtactaaaaaaacatatgaacaattacaagaa
agaccttctgataatagtacagttgattttgtacttatgttgagaaaaggtaacaaacaa
caatacaaaaatttagcagttccagtatcatcagaattagcaatgaatcttcgaaacaga
gaacaagaacagaaagaagaaaaagaacgagttaaaagattgacattaaatattacagaa
agacaagaggaagaagattatcaagaaacaattaatcagagtaccaagccagtaacggta
aacttgaatagagaacggcgacaaaaatataatcatcccaaaggtgcaccagatgctgat
cttatttttggtcctaaaaaaatacggtag
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