Apis florea (little honeybee): 100871234
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Entry
100871234 CDS
T09140
Name
(RefSeq) exosome complex component CSL4
KO
K07573
exosome complex component CSL4
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
100871234
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100871234
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
100871234
Prokaryotic type
Archeal mRNA degradation factors
Exosome components
Core exosome
100871234
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ECR1_N
EXOSC1
RRP4_S1
ECR1_N_2
FapA
TUTase
Motif
Other DBs
NCBI-GeneID:
100871234
NCBI-ProteinID:
XP_012344906
LinkDB
All DBs
Position
Unknown
AA seq
197 aa
AA seq
DB search
MDKNKDIIVCVPGQRLCISDKVNIAGPGTYEQQGYIYSKLAGLVKLVEKENTRTIEVHGI
TEQSIVPAPGDIVTAMVTIVNQRFCKCSIKCIGDIVLTRPYRGILRKEDVRAIDKDNIQM
YKCFRPGDIILARVMPMTEGHTYQLSTAENELGVVIAHSEEGVAMIPINWTQMQCPKTLR
KEFRKVAKVIPEHVIAD
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
atggacaaaaataaagatattattgtatgtgtaccaggacaaaggttatgtatttctgac
aaagttaatattgctggaccaggaacttatgaacaacaaggctatatttattcgaaatta
gctggtttagtaaaattagtagaaaaagaaaatactcgaactattgaagttcatggaata
acagaacaaagtattgttcctgcacctggtgatattgtaacagctatggttactattgtt
aatcagagattttgcaaatgtagtataaaatgcataggtgatatcgtattgacaagacct
tatagaggtattttaaggaaagaagatgtacgagcaatagataaagataatattcaaatg
tacaagtgcttcagacctggagatattattcttgctagagttatgccaatgacagaagga
catacttatcaattaagtacagcagaaaatgaactaggtgtagtgattgcacatagtgaa
gaaggtgtagctatgatacccattaattggacacaaatgcaatgccctaaaacattacga
aaagagttcagaaaagtagcaaaagtaattccagagcatgttattgcagattaa
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