Apis florea (little honeybee): 100871304
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Entry
100871304 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: regulator of nonsense transcripts 3A
KO
K14328
regulator of nonsense transcripts 3
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03013
Nucleocytoplasmic transport
aflr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
100871304
03015 mRNA surveillance pathway
100871304
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100871304
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Surveillance complex
100871304
mRNA cycle factors
P-body specific factors
100871304
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Smg4_UPF3
Motif
Other DBs
NCBI-GeneID:
100871304
NCBI-ProteinID:
XP_012342131
LinkDB
All DBs
Position
Unknown
AA seq
623 aa
AA seq
DB search
MTMTEETQQSETAAQNEAQTSSPDVGKVKDSKKEKCRPMTKVVIRRLPPTMTQEQFLEQV
SPLPENDYLYFVKADMSMGQYAFARAYINFVEQQDIFMFREKFDNYVFIDSKGTEYPAVV
EFAPFQRLPKKRTGKKKDLKCGTIESDPYYISFLETRKNQEAESNISQPKTEYSYQPPDN
TPKKITTTPLLEYVKQRKQEKQRLRDEKREERRRRDLERRRTKEDPIISKVLKNQDLDKE
MCKDNKENREEKDKFSPKDIKNRIKKDDKLRDKISRDRDSKSITKGYRERIEDRNKDKDI
KHQRRHEDKKIYGRRDERDGIKDDRRFDGKDDRKYDFKEDIKDSRERKIEEKRGKSYEKM
RQEKKRLAETKKQNVEFNVDTENNVKLRCEDEEFQKKEFQVDSYENIKENEESIDDKEDI
KNSKEKEKQETNEKKVLIEDSVQDYEIKEQKKSDTILSTIESNKDIEKSKSNEDINKETN
EDDESEEKKDSKLTKRRSSLESGGEGGTGDGNCLRRHKSLDGGDQNNLQKTENEDKEKDK
KDPRLERRIRNKDRPAMEIYRPGMGKFSKQRLEREKSNTNDERASLSQSPTPNLNSNNLC
KSGKPGTEVRSMTFKRSISRDLV
NT seq
1872 nt
NT seq
+upstream
nt +downstream
nt
atgacaatgactgaagaaacacaacagtctgagactgccgcacaaaatgaggcacaaact
agttctccagatgttggaaaagttaaagatagtaaaaaagaaaaatgccgacctatgaca
aaggtagtaatacggagattacctccaactatgactcaagaacaatttctagaacaggtt
tctccattgccagaaaatgattatctttattttgtgaaagctgatatgtctatgggacaa
tatgcttttgcccgtgcttatattaactttgttgaacaacaggatatttttatgttcaga
gaaaaatttgataattatgtatttatcgactccaaaggtacagaatatccagctgtagta
gaatttgcaccttttcaaagattaccaaaaaaaagaacaggaaaaaagaaagatttaaaa
tgtggtacaattgaatcagatccttattatataagcttcttagaaactcgtaaaaatcaa
gaagctgaatctaatatatcacaaccaaaaacagaatactcatatcaaccacctgataat
acaccaaaaaaaattacaaccactcctcttttggaatatgtaaaacaacgtaaacaagaa
aagcaacgtctcagagatgaaaaacgtgaagagagacgacgaagagacctagaacggagg
cgaacaaaggaagatcctatcatatctaaggtattgaaaaatcaagatcttgataaagaa
atgtgtaaagataataaagaaaatagggaagaaaaggataaattttcgcctaaagatata
aaaaatcgtattaaaaaggatgataaattacgtgataagatatcacgtgatcgagattct
aaatcaattacaaaaggatacagagaaagaattgaagatagaaataaagataaagatata
aagcatcaaagacggcacgaggataagaagatatatggaagacgtgatgaaagagatggt
ataaaagatgatagaagatttgatggaaaagatgatagaaaatatgatttcaaagaagat
attaaagattctagggaacgaaaaatagaggaaaaacgaggtaaaagttatgaaaaaatg
aggcaagaaaaaaaaagacttgcagaaaccaaaaaacagaatgtagaatttaatgttgac
acagaaaataatgtaaaattaagatgcgaggacgaagaatttcaaaaaaaggaatttcaa
gttgattcgtatgaaaatattaaggaaaatgaagaatctatagatgataaagaagatatt
aaaaacagtaaagaaaaagaaaaacaagaaactaatgaaaaaaaagttttaatagaagat
tctgtacaagattatgagatcaaagaacagaaaaaatcagatactatattatctactatt
gaaagtaacaaagatattgaaaaatcaaaatctaatgaagatattaataaagaaactaat
gaagatgatgaatctgaagaaaaaaaagattcaaaactcacaaagagacgcagttcactt
gaaagtggaggagaaggtggtacaggagatggaaattgtttaagaaggcataaatctttg
gatggaggagatcaaaataatttacagaagactgaaaatgaagataaagaaaaagataaa
aaggatccacgattagaacgtcggattagaaataaggatcgacctgctatggagatttat
cgtcctggaatggggaaatttagtaaacaaagattagaacgagaaaaatctaatactaac
gacgaaagagcatcactttcacaaagtcctactccaaaccttaattctaataatctttgt
aaatcgggaaaacctggaacagaagtacgttctatgacgtttaaacgtagtattagtcgt
gatttggtataa
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