Apis florea (little honeybee): 100871308
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Entry
100871308 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: HBS1-like protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
100871308
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
aflr03019
]
100871308
Messenger RNA biogenesis [BR:
aflr03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
100871308
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
HBS1_N
MMR_HSR1
AAA_22
UBA_RAD5A
Motif
Other DBs
NCBI-GeneID:
100871308
NCBI-ProteinID:
XP_031773438
LinkDB
All DBs
Position
Unknown
AA seq
719 aa
AA seq
DB search
MSRHRDIRCMNYSEEYEGYDDVYGHSVEDDYCVSPSAEQFLFDRSKQQNIASFITEPDIV
EDNEDNEELPISLNEEDIVLTEIEWAKLMSCMESIKSVIGDTISESEIKKKIIQSKFDTE
LAIDLILKETSKITDSSIVNKNNLELHSDATSIKSHSNSFIIPKLSFNKQENIEGKKSSK
STFQVTTSSNVKIIPAGKRPIVKGFNIGGIENTDVMNLHIESPRSQSPFSDYNSPEIKKK
ENVLKEKKTXSLNTNSPRCQSPISGHQTPDLDSKLKLNEEKIDIMKIYKDKRGNSKEQLH
LIVVGHVDAGKSTLLGRLLCDLGQVPSRLIHKYQQESKKIGKQSFAYAWVLDETGEERER
GITMDIGHSKFETKTKSITLLDAPGHKDFIPNMITGATQADVALLVVDATRGEFETGFDS
GGQTREHALLLRSLGISQLAVIVNKLDTVDWSKERFDEIVSKISIFLKQAGFKDNVIFVP
CSGLSGENILTKPKESLSNWYKGPTLVDVIDNFKCPERHINKPFRFSINDIFKGMGSGFC
VSGHVETGMVSLGDKILILPRNETAVIKSLQIDEISITNAFAGDQVSLTLSGIEQQNVGI
GDIICNPQNPVPVTSCFQAHIVVFTVKVPIIKGLPIVIHQQSLVQPGIITKLIAQLHRTT
SEMIKKKPRCLPKNSSAIIEITMQNPICMELYKDIKQLGRVMLRVEGTTIAAGLVTKIK
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atgtctcgtcatcgcgacatacgatgcatgaattactcagaagaatatgaaggttatgat
gatgtttatggacattcagtagaggatgactactgtgtatcccctagtgctgagcaattt
ttatttgatcgaagtaaacaacaaaatattgcatctttcattacggaaccagatatagta
gaagataatgaagataatgaggaacttccaatatctttaaatgaagaagatatagtactt
acagaaattgaatgggctaagcttatgtcatgcatggaatctattaaaagtgttatagga
gatacaatatctgaatctgaaattaaaaagaaaattattcaatcaaaatttgatactgaa
ttagcaattgatttaattttaaaagaaacttcaaaaattactgattcatctatagttaat
aaaaataatttggaacttcattcagatgctacatcgattaaatctcattctaattcgttc
attatacctaaattatcatttaataaacaagagaatattgaaggtaaaaaatcatccaaa
tctacatttcaagttacaacatcttctaatgtgaaaatcattcctgctggaaaacgacct
attgtaaaaggctttaatataggcggaattgaaaatacagatgtaatgaatcttcatatt
gagagtcctcgctctcaaagtccattttctgattataatagcccagaaataaaaaagaag
gaaaatgtattgaaggaaaaaaagactnattctttgaacacaaatagtccacgatgtcaa
tctccaatatcaggacatcaaacacctgatttggattctaaattaaaacttaatgaagag
aaaattgatattatgaagatttataaagataaaagaggaaatagcaaagaacaattacat
ttaattgttgttggtcatgtagatgctggtaaaagtactttattaggacggctcttatgc
gatttaggacaagttccatcaagactaatacataaatatcaacaagaaagtaaaaaaata
ggaaaacaatcctttgcttatgcatgggttcttgatgaaacaggagaagaacgagaacgt
ggaataacaatggatattggtcattctaaatttgaaacaaaaacaaaatctattacttta
ttagatgcacctggtcataaagattttatacccaatatgattactggtgctactcaagca
gatgttgctttattagtagtagatgccactagaggagaatttgaaactggttttgatagt
ggtggtcaaactagagaacatgcattattattacgttcattgggtatatctcaattagca
gtaatagtaaataaattagatacagtagattggtcaaaagagagatttgatgaaatagtg
agcaaaataagcatattcttgaaacaagctggattcaaagataatgttatttttgttcct
tgtagtggtctatctggtgaaaatatattaacaaaacctaaagaatctttgtctaattgg
tataaaggacctacattagttgatgttatcgataattttaaatgtcctgaacgtcatata
aacaaaccatttcgtttttcaattaatgatatatttaaaggcatgggatctggattctgt
gtttctggtcatgtagaaacaggaatggtatctttgggtgataaaattttaatattacca
agaaatgaaactgcagtgattaaaagtttacaaatagatgaaatatctataacaaatgca
tttgctggagatcaagtttctttaacattatctggaattgaacaacaaaatgtaggaatt
ggagatattatttgtaatcctcaaaatccagttcccgtaacatcatgtttccaagctcat
attgttgtattcactgtgaaagtaccaattataaaaggtcttcctatagtaattcatcaa
caatctttagttcaacctggtattattactaaattaatagcacaacttcatagaaccact
agtgaaatgataaaaaagaaaccacgttgtttaccaaaaaattcaagtgctattattgaa
attacaatgcaaaatccaatttgtatggaattatataaagatattaaacaattaggtaga
gttatgttacgtgtagaaggaacaactattgcagctggtttagttacaaaaattaaataa
DBGET
integrated database retrieval system
