Apis florea (little honeybee): 100871597
Help
Entry
100871597 CDS
T09140
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(IV) chain
KO
K06237
collagen type IV alpha
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr04382
Cornified envelope formation
aflr04512
ECM-receptor interaction
aflr04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
100871597
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
100871597
09150 Organismal Systems
09158 Development and regeneration
04382 Cornified envelope formation
100871597
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
aflr04147
]
100871597
00536 Glycosaminoglycan binding proteins [BR:
aflr00536
]
100871597
Exosome [BR:
aflr04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
100871597
Glycosaminoglycan binding proteins [BR:
aflr00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
100871597
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
100871597
NCBI-ProteinID:
XP_031773209
LinkDB
All DBs
Position
Unknown
AA seq
1625 aa
AA seq
DB search
MGFRGPPGLPGMQGDVGDTVYGIKGAEGEQGDRGEPGPPSNGEFKEKRKXTPVKGATGSK
GVRGDVGDRGRKGEMGAKGPIGRPGFFGIKGTKGEQGDDGPRGKQGAEGPPGPAGEKGEK
GAPGYAGKPGPDGLDGELGDAGNQGPPGKQGAPGEPGKYIPELDEIIQGNIGIQGDLGPP
GNPGEPGTPGLPGKVGYIGPPGPPGPPGSSGLPGLKGSSVKGEPGDDGFTGEMGLQGPPG
APGIPGIVGPKGYPGLTIIGPPGPDGKPGYPGVPGLPGDRGDPGVQGPKGFPGKGSRNPG
PPGERGLPGIPGLPGPDGWPGLPGPKGVKGLKGDDCDCPPVKPGPKGEQGDSGLDGYPGT
PGYPGLPGPRGFKGVQGKRGIVGPRGLEGDSGRPGVAGPQGAKGERGRLIVPDKKIIGTP
GDVGDKGYPGVEGPTGSRGEPGFRGDTGPEGPKGEKGELGPPGRPGGDGYPGINGIPGEK
GDDASTPIEFLKGEPGSPGIPGLRGPPGDKGAKGERGISSQYNIQLKGEKGYKGERGDPG
EDGGKGPEGWPGDEGFVGPPGIPGSVGISRQGPVGLKGYPGMPGDQGPRGAPGTPGSQGP
VGFPGRVGNKGDRGDPGSNQTYGDYGLMGWTGEKGNVGDAGPVGYRGRPGPDGTKGAKGS
KGAPGSAGIPGLQGVKGQRGDRVQGPKGMPGIHGQPGMPGRMGEVGIPGPDGAPGFDGMK
GLKGEIGFMGRRGDDGDIGPPGYLGRDGILGLPGPPGPDGDVGEIGEPGSRGWPGLEGLS
GPAGAKGEQGDPGPVGVPGIVGLPGPKGISGDPGPVGLDGLPGENAFSGPQGDIGEPGFM
GEVGAPGLPGIDGRPGLPGEPGLATDGFNGLRGEKGEAGINGFNGLPGPKGEIGDMGLDG
LKGARGXLGVKGRPGIPGAPGLHGVKGERGPIGPPGIEGPKGKRGLDGDPARMGLPGMPG
DQGYRGSPGLMGAPGPKGYVGEPGLPSYGEAEAGDFGMPGLDGLPGEKGERGEQGFVGLP
GRKGMKGSVGYRGPDGFPGVPGFPGLPGDEGPPGFPGIPGQFAEAGEDGRPGMDGIPGTP
GMPGQKGAPGEYGPNGPIGITGDVGFSIRGPKGLPGDIGPRGFDGYPGAPGLQGLPSLPG
LPGPKGYPGEPGLLGISIKGEPGERGLDGFDGRPGAKGIRGDSGLSGFVGLPGLKGESGD
VGEPGLIGLPGPPGPNGPKGDRGINPFSPFPRKGLPGDTGPSGLPGFPGLPGMLGEPGED
GLPGREGEPGIIGPPGLPGPEGVEGPAGYPGPPGVIGRQGPPGSPGVPGNPAPPAPGPRN
RGFYFARHSQSEMIPLCPPNTVKLWDGFSLLHVRANGKSHGQDLGTVRKLRRKIQYYAFT
FCNLNNQCNYADREEFSYWLSTTEPMPMSMAPIPAPQVGRYISRCSVCEAPTRAIAVHSQ
TMAIPQCPGGWEELWIGYSFLMHRDVGNGGGGQSLVSPGSCLEEFRIRLFIECRSKGTCN
YFSTATTFWLTTIKDYEMFRKPIPQTLKTDHTSRVSRCVVCLRRRVTEDVKSLKPIISNG
QREQVGNIRYLPHSRPVVHYPDYQYQKKPPIGRTRGPNRRVPYHYRKKGGRLRKPERTTE
PSEAA
NT seq
4878 nt
NT seq
+upstream
nt +downstream
nt
atgggtttccgtggccctcccggtttgccaggcatgcaaggtgacgtcggggacacggtg
tacggtataaagggcgcggagggtgagcaaggagacagaggagaacctggacctccgagc
aacggggaattcaaggaaaaacgaaagntgacgccggtgaagggcgctaccggttcgaaa
ggagtacgaggagatgttggggatcgaggaagaaagggagaaatgggcgccaaaggacct
atcggtcggccaggatttttcggtatcaaaggtacgaagggggagcaaggtgacgacggg
ccaaggggtaaacaaggggcggagggcccgccaggacccgcgggagaaaagggagagaag
ggagcgccaggatacgctggaaaaccgggaccggacggattagacggagaattgggagat
gcggggaatcaaggaccacctggtaaacaaggagctcccggagaacctggaaagtacata
ccggaattggacgagataattcaaggaaatatcgggattcaaggagatttaggtccaccc
ggtaatccaggggaaccaggaacaccaggtttacccggcaaagtaggttatatcgggcca
cctggtcctccaggacctcccggctcctctggtttaccaggattgaaaggatcttccgtc
aaaggagagccaggagacgatggttttaccggagagatgggtctgcaaggacctccgggt
gcgccgggtatacctggaatcgttggacctaaaggataccctggattaacgataattgga
ccaccaggtcccgatggaaaacctgggtatccaggtgtgcctggtttgcctggagatcgc
ggtgatcccggtgtccaaggtccgaaaggttttcctggtaaaggatcgaggaacccgggt
cctccgggtgaacgcggtttaccaggcataccgggacttcccggacccgatgggtggcca
ggtttaccaggtcccaaaggtgtgaaaggccttaaaggagacgattgcgattgcccgcca
gtgaaacctggaccgaagggtgaacaaggcgattctggattggatggatatcccggcacg
ccagggtatccaggattgcccgggccacgtggattcaagggggtacagggtaaacgaggt
atcgttgggccgagaggattggaaggcgatagcgggaggccaggagtcgcgggccctcaa
ggagccaagggagaaaggggacgattgatagtgccagacaaaaaaataattggaacgcct
ggagatgtcggcgacaaaggttatcctggcgtcgaagggccgacagggtcgcgaggagaa
cctggatttcgcggtgatacgggacccgaagggcccaaaggggagaagggcgagctcggt
cctcctgggcggccagggggcgacggttatcccggaataaatggtattccgggtgaaaaa
ggtgacgatgcatcgacgccgatcgaatttttgaaaggtgaaccaggttccccgggcatc
ccgggactcagaggtccgccgggtgacaaaggagcgaagggagagcgcgggatatcctcg
caatacaatatacaactgaaaggagagaaggggtacaaaggggaacgcggtgatccagga
gaggacggtggcaaaggcccggaaggatggccaggtgacgaaggatttgtaggaccaccg
ggaattcctggatctgtcggtatatcgcgtcaagggcccgtaggtctgaaaggatatccc
ggtatgccgggagatcaaggtcctcgcggtgcccccggcacaccaggatcgcaaggacct
gtcggtttcccgggacgcgtaggtaacaaaggtgatcgaggggatcccggctcgaatcag
acgtacggcgattacggattaatgggttggaccggagagaaaggaaacgtgggtgatgcc
ggacctgtgggttaccgtggtaggcctggaccagatgggacgaaaggcgcgaaaggaagc
aaaggtgctcctggctcggcgggtatacctggacttcagggagttaagggtcaaagagga
gacagagttcaaggacctaaaggtatgcctggaatacatggtcaacctgggatgcctgga
agaatgggagaagtcggtattccaggacctgacggggcacctggatttgacggaatgaaa
ggtctgaaaggagaaatcggttttatggggcgcagaggtgacgacggtgacattggacca
ccgggttatttaggaagagacggtatactgggtctgccgggaccacctggaccggacgga
gacgtcggtgaaatcggtgaacctggctctcgtggttggcctggtctggaagggttatcc
gggccagcaggagctaaaggggaacaaggagatcctgggccggttggtgttccagggatc
gtgggattacccggaccgaaaggtatctctggagatcctggaccggtcggtttggacgga
cttccgggtgaaaatgcgtttagcggtccgcaaggcgacataggggagcctggttttatg
ggagaagttggagctccgggattgcccggtatagatggacggcctggtctacctggtgaa
ccaggtttggctaccgatggtttcaacggtttacgaggagaaaagggtgaagctggtatt
aacgggttcaatggattgccgggaccaaaaggagagataggtgatatgggcctagatggc
ctcaagggagcaagaggangattgggggttaaaggaaggcctggaatacctggtgctccc
ggtttacacggtgtaaagggtgaacgaggtccgatagggccgcccggtatcgagggacct
aaaggtaaaaggggattggatggtgatccagctcgaatgggtctaccgggaatgcctggt
gatcaaggttatagaggatcgcccggtttaatgggtgcaccaggacctaaaggatatgtc
ggagagcctggtttgccatcgtacggtgaggcagaagcgggtgattttggaatgcctgga
ctcgatggtttaccaggcgaaaaaggagaacggggtgaacaaggtttcgttggattacct
ggaagaaaaggtatgaaaggtagcgttggataccgtggacctgatggatttccgggtgta
ccaggtttcccaggtcttcctggtgatgaaggacctccaggttttccaggaatacctggc
caattcgctgaagcaggtgaagatggacgtcctggaatggatggaatacctggtactcca
ggaatgccaggtcaaaaaggtgctcccggagaatatggacctaatggccctatagggatt
acgggagacgttggtttcagtattcgtggcccgaaaggacttccaggagacataggtcca
cgcggtttcgatggttatccaggagctccaggtttgcaaggattgccaagtttgcctgga
ttaccaggaccaaaaggttatccaggggagcctggattacttggtatatccataaaagga
gaaccaggagagcgaggattggatggattcgatggtaggccgggagcaaaaggaataaga
ggtgattcgggcctttctggattcgtaggattgcctggactgaaaggagaatccggtgac
gtaggagaacctggtctaattggacttcccggacctccaggacctaatggaccgaaaggt
gatcgtggtataaatcccttctcaccattcccaagaaaaggtttacctggagatacagga
ccatcaggattaccaggttttccggggcttcctggaatgttaggcgaaccaggagaagat
ggattacctggaagggaaggagaacctggaataataggtccaccgggtcttccaggacca
gaaggtgtggaaggccctgctggttatcctggcccgcctggtgtgattggacgacaagga
cctccaggatctcctggagtaccaggaaatccagcaccaccggcaccaggacctcgaaac
agaggcttctactttgctcgacactcgcaatccgagatgataccgttatgtccaccgaac
acggtcaaactttgggacggtttctcgttgttgcatgtaagagccaatggaaaatctcac
ggacaagatcttggtacggtccggaagttgcgtcgtaaaattcaatactatgccttcacg
ttctgcaacttgaacaatcaatgcaactacgcagacagagaagagttcagctactggctg
agcacgacggaacccatgcctatgtctatggctccaataccagcacctcaagttggcaga
tacatctctagatgttcggtttgcgaggccccaacccgggcaatcgcggttcacagtcaa
actatggctataccacagtgtccaggtggttgggaagagctttggatcggatatagtttc
ctcatgcatcgagacgtgggcaatggcggaggtggccaatctctagtttctcccggctct
tgtttggaagaatttcgcatcaggctgttcatcgagtgccgtagtaaaggcacgtgcaac
tatttttccactgccactaccttctggttaaccaccatcaaagattacgagatgttccgt
aaaccgattccacaaacattgaagacagatcacacatcgcgagtaagtcgttgcgttgtc
tgtcttcgacgtcgcgtaacggaggacgtgaaatcgttaaagccaatcatatcgaacggg
caaagagagcaagtgggcaatattcggtatttgccacattctcggcctgtcgttcattat
ccggactatcaataccagaaaaaaccaccgataggaagaacgagaggaccgaacaggcgc
gttccgtatcattatcgaaagaaaggtggcagattacgtaaaccggaacgaacaacggag
ccatcggaagcggcttaa
DBGET
integrated database retrieval system
