Apis florea (little honeybee): 100872779
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Entry
100872779 CDS
T09140
Name
(RefSeq) putative pre-mRNA-splicing factor ATP-dependent RNA helicase PRP1 isoform X1
KO
K12820
pre-mRNA-splicing factor ATP-dependent RNA helicase DHX15/PRP43 [EC:
5.6.2.6
]
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100872779
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aflr03041
]
100872779
03009 Ribosome biogenesis [BR:
aflr03009
]
100872779
Enzymes [BR:
aflr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100872779
Spliceosome [BR:
aflr03041
]
Complex A
U2 snRNP components
U2 related factors
100872779
Complex B
100872779
Complex C
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-SnRNP related factors
100872779
Ribosome biogenesis [BR:
aflr03009
]
Eukaryotic type
90S particles
Helicases
100872779
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
Helicase_C
DEAD
AAA_19
AAA_22
nSTAND3
SRP54
Flavi_DEAD
ResIII
Lantibiotic_a
T2SSE
AAA_7
ABC_tran
TsaE
ATPase
AAA_25
Motif
Other DBs
NCBI-GeneID:
100872779
NCBI-ProteinID:
XP_012345094
EnsemblRapid:
LOC100872779
LinkDB
All DBs
Position
Unknown
AA seq
718 aa
AA seq
DB search
MSKRRIEVVDPYIKRKADGSAASNSTTTPSTAPKNQVQINPYTSLPYTPRYHEFYKKRIT
LPVFEYRADFMRLLAQHQCIVLVGETGSGKTTQIPQWCVEYSMRIGNKGVACTQPRRVAA
MSVAQRVSEEMDVALGQEVGYSIRFEDCSSPKTILKYMTDGMLLREGMSDPMLDAYQVIL
LDEAHERTLATDLLMGVLKEVIKQRPDLKLVIMSATLDAGKFQQYFDNAPLMNVPGRTHP
VEIFYTQEPERDYLEAAIRTVTQIHMCEEVVGDLLLFLTGQEEIEEACKRIKREMDNLGP
EVGELKCIPLYSTLPPNLQQRIFEPTPPTKPNGAIGRKVVVSTNIAETSLTIDGVVFVID
PGFAKQKVYNPRIRVESLLVSPISKASAQQRAGRAGRTRPGKCFRLYTEKAYKNEMQDNT
YPEILRSNLGSVVLQLKKLGIDDLVHFDFMDPPAPETLMRALELLNYLAALDDDGNLTDL
GAVMAEFPLDPQLAKMLIASCNHNCSNEILSITAMLSVPQCFVRPNESKKAADDAKMRFA
HIDGDHLTLLNVYHAFKQNFEDPQWCYDNFVNYRSLKSGDNVRQQLSRIMDRFCLKRTST
EFTSKDYYINIRKALVNGFFMQVAHLERTGHYLTIKDNQIVQLHPSSCLDHKPEWVIYNE
FVLTTKNYIRTVTDIKPDWLLKIAPQYYDLQNFPQCEAKRQLEVIQAKLDSKQYQEGF
NT seq
2157 nt
NT seq
+upstream
nt +downstream
nt
atgtcaaaacggagaatcgaggttgtggatccgtatattaaacggaaagcagatggctca
gcagcatccaacagtacaactacaccttcaacagcaccaaaaaatcaagttcagataaat
ccttatactagtctaccttatacaccaagatatcatgaattttataaaaaaagaatcact
ctacctgtatttgaatatcgtgctgattttatgagattattagcacaacatcaatgtatt
gtacttgttggagaaacaggctcaggtaaaactacacaaataccacaatggtgtgtagaa
tattcaatgcgtattggcaacaagggtgttgcttgtactcagccaagaagagtagcagct
atgtccgttgcacaaagagtctcagaagagatggatgttgcattaggccaagaagtagga
tatagcattcgttttgaagattgtagttctccaaaaactatattaaaatatatgactgat
ggtatgcttttacgtgaaggcatgtcagatcctatgctagatgcttatcaagtgatatta
ttagatgaagctcatgaaagaactttagccacagacttgctaatgggtgtgttaaaagaa
gtgattaaacaaagaccagatttgaaacttgtgattatgagtgcaactttagatgctgga
aaatttcaacagtattttgataatgcacctttaatgaatgtacctggcagaactcatcct
gttgaaattttttatacacaagagcctgaaagagattacttagaggctgctatcagaact
gttactcaaatacatatgtgtgaagaagtagtaggagacttactcttatttttaactggt
caagaagaaattgaagaagcttgtaaaagaattaaacgagaaatggataatttaggtcca
gaagtaggtgaactcaaatgtataccactttattctacactgcctccaaatcttcaacaa
agaatctttgaaccaacaccacctacaaaacctaatggtgctattggtagaaaagtagta
gtttcgactaatatcgcggaaacatcattaaccattgatggtgttgtttttgtcattgat
cctggatttgcaaagcaaaaggtatataatcccagaatccgtgtagaatctcttcttgta
tcacctattagtaaagcttctgcacaacaaagagctggtagagctggtcgaacaagacct
ggaaaatgttttagattgtatacagaaaaggcatataaaaatgaaatgcaagataatact
tatcctgaaattttaaggtctaatcttggcagtgttgtattacaattaaaaaaacttggc
attgatgacttggtacattttgattttatggatcctcctgcaccagaaacacttatgaga
gctctagaacttcttaattatttggccgctttagacgatgatggaaatctcacagatttg
ggtgctgtgatggcagaatttccattagatccacaattggcaaagatgctcatcgcatct
tgcaatcataattgtagtaatgagatattgagcattactgctatgttgtcagtcccgcag
tgttttgtgaggccaaatgaatcaaagaaagctgcggatgatgctaaaatgcgatttgca
catatcgacggagaccacttaacattattgaatgtctatcatgcctttaagcaaaatttc
gaagatccacaatggtgttacgataatttcgttaattatcgatctttaaaaagtggtgat
aatgttagacaacaactaagtagaataatggatagattttgtttaaaacgtacttcaaca
gagttcacatcaaaagattattatattaatattagaaaagctcttgtaaacgggttcttc
atgcaggtcgctcatttagagaggactggtcattatttaactattaaagataatcaaatt
gtacaacttcatccaagcagttgtttagatcataaacccgagtgggtaatttataatgaa
tttgtgcttacgaccaaaaattatatcagaacagttacagatattaaacctgattggttg
cttaaaatagcaccacaatattatgatttacaaaatttcccacaatgtgaagcaaagagg
caattggaagtaattcaagcgaaattagattcaaaacagtatcaggaaggattctaa
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integrated database retrieval system
