Apis florea (little honeybee): 100872883
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Entry
100872883 CDS
T09140
Name
(RefSeq) 3'-5' RNA helicase YTHDC2 isoform X1
KO
K20099
ATP-dependent RNA helicase YTHDC2 [EC:
5.6.2.6
]
Organism
aflr
Apis florea (little honeybee)
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aflr03041
]
100872883
Enzymes [BR:
aflr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
100872883
Spliceosome [BR:
aflr03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
100872883
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HA2_C
OB_NTP_bind
R3H
DEAD
Helicase_C
RNA_hel_CTD
Ank_2
nSTAND3
WHD_HA2
Ank
AAA_19
AAA_22
ATPase
Ank_5
PhoH
NPHP3_N
nSTAND_NTPase5
NACHT
AAA_23
Motif
Other DBs
NCBI-GeneID:
100872883
NCBI-ProteinID:
XP_012340042
LinkDB
All DBs
Position
Unknown
AA seq
1157 aa
AA seq
DB search
MPRRNRHKKTPLIGEDTRIAVNLTLKKLLETPDQKELEFPSSYTAEERAYIHKLAYELGL
KSKSRGKGTNRFLTVYKREGSTIVQADAVIKLQKSSRQSIYNLLQAFPLNHKECQDLLPP
IERERPPNTDVSVNTNTKAMGRLNNSVPQIPQLKTNFDVLNYRKALPIFNFREDILDALN
NNQVVIIGGETGSGKTTQVPQFILEHCQQRQQPCRIICTQPRRLSAVSVAERVAFERDEK
IGQTFGYQIRLESRVAPKTLLTYCTNGVLLRTLMAGDSALSTVTHVIVDEVHERDRFCDF
LLIALKDALQKHKSLKLVLMSATLDVNIFVKYFNKCAVINVLGRSYDVDTYFLEDILKMT
GYMTKEMLSKRKEFMNKKDQHQILETWTQYKPQQSGSNAMNERCILPAPILAQQNEPVPE
KVKLEPWLAEEMDKSISDAWLRGGEDNFAQLLYFILSENVSVDYQHSTTLVTPLMVAAGK
GCINTTEQLLNLGANLNLRAANEWTALDWAKNMNQTECAELIEAYMKTYDCTVQDETKTH
AKDISLPEEDKFLLDVYQHTFNDDKINYDLLLHLILHIHLKMPPGSLLVFLPGYDDIVTM
REKINNEEKEMNKGLRYNLYVLHSNMQTCDQKKVFKPSPVGTRKIILSTNIAETSITIDD
VVYVIDSGKVKEKSFDALSGVCTLKSNWISQACAKQRKGRAGRCRKGICYRLFSSVRYNS
MEPYQTPEILRSPLQELCLYTKHLAAGNTPIAEFLDRALEPPSNVVTRNAVQLLKTIDAL
DPWEDLTELGSHLLDLPIEPRLGKMLLYAVVLKCLDPVLTIVCSLAYKDPFVLPFQPSQK
RAATAARKRFATNTYSDHMAVLRAFQGWQNARAGGKERIFCEQNFISAAVMEMVVGMRTQ
LLGQLRASGFVRARGPGDIRDLNSNSENWAVVKAALTAGLYPNLIRVDREHLQLRTQKEV
KVFFHPSSTLRDYPKSPRMTSTQTYAANVEALPCDWLLYEEMSRTGRFCHVKMVTLVNPL
TVALFCGPARLSVDVIYEAESVPESESDSEVDESNEGTIFKLDDWVVFKLDPETARFFLH
LRQKWNALFLRRMKTPNKAMSQLDEKVVSTLVSVITNEEQACGLQQPSGIGQRPRPLIVD
YYPANVRRTDDFVERNF
NT seq
3474 nt
NT seq
+upstream
nt +downstream
nt
atgccacgtagaaatcgtcataagaaaactcctcttattggggaagatactagaattgca
gtaaatttaacattaaaaaagttattagaaactcctgatcagaaagaattagaatttcca
tcttcatatactgcagaggaaagagcttatattcataaattagcatatgaacttggatta
aaatctaaaagtagaggtaaaggtacaaatcgttttttaactgtgtacaaaagagaaggt
tcaactatagttcaagctgatgctgtaataaaattacaaaaatcatcaagacagagtata
tataatttattacaagcttttccattaaatcataaagaatgtcaagatttattaccacca
attgaacgagaacgacctcctaatacagatgtttcagtaaatacaaatacaaaagcaatg
ggacgattaaataatagtgtgcctcaaataccacaattgaaaactaattttgatgtattg
aattatcgcaaagctcttccaatttttaactttagagaagatattcttgatgcattaaat
aataatcaagtagttataataggaggtgaaacaggtagtggtaaaactactcaagtccct
caatttattcttgaacattgccaacaaagacaacaaccttgcagaattatttgtactcaa
ccaagaagactgtcagctgtttcagtagctgaaagagtagcatttgaaagagatgaaaaa
attggtcaaacatttggttatcaaataagacttgaaagtagagttgctccaaaaactctt
ttaacatattgcacaaatggtgtacttcttagaacacttatggcaggtgattctgctctg
agtactgtcacgcatgtcattgtagatgaagttcatgaacgtgatagattttgtgatttt
cttctaatagctttaaaagatgcattgcaaaaacacaaatctcttaaacttgtacttatg
agcgctacattagacgttaacatttttgtaaaatattttaacaaatgcgcagttataaat
gtcttgggtagatcatatgatgtcgacacgtattttcttgaagatatcttaaaaatgaca
ggttatatgacaaaagaaatgctttcaaagagaaaagagtttatgaataaaaaagatcaa
catcaaattttagaaacctggactcaatataaacctcaacaatcaggatcaaatgctatg
aacgaaagatgcatattacctgcaccaatattagcacagcaaaatgaaccagttccagaa
aaagtaaaattagaaccatggttagcagaagaaatggataaaagcatttcggacgcatgg
ttacgtggaggcgaagataattttgcacaacttttatatttcatactttccgaaaatgtc
tcagtagattatcaacattccacaacacttgtaactccgcttatggtagctgcgggtaaa
ggatgtataaatactactgaacaacttttaaatttaggtgcaaatttaaatttacgagca
gccaatgaatggactgcattagattgggcaaaaaatatgaatcaaactgaatgtgctgag
ttaatagaagcatatatgaaaacttatgattgtacagtacaggatgaaacaaaaacacat
gctaaagatatttcacttccagaagaagataaatttttattagatgtatatcaacataca
tttaatgatgataaaattaattatgatcttcttttacatttaattttgcacattcattta
aagatgcctcctggttcccttttagtatttttgccaggatatgatgatattgtaactatg
agggaaaaaataaataatgaagaaaaagaaatgaataagggtttacgctataatttatat
gtacttcattcaaatatgcaaacatgtgatcaaaaaaaagtgtttaaaccaagtcctgta
ggaactcgaaaaattattctttcaacaaatatagctgaaacaagtattacaattgatgat
gtagtatatgttattgattcaggaaaagtcaaagaaaaatcatttgatgcattatcagga
gtatgtacacttaaatctaattggatttctcaagcttgtgcaaaacaacgtaaaggtaga
gctggaagatgtagaaaaggcatttgttatcgtttattttcgtcagttcgatataatagt
atggagccttatcaaactcctgaaattttaagatcaccactacaagaattatgtttatat
acgaaacatttagctgcaggaaatacacctattgcagaatttttagatcgagcattggaa
ccaccttctaatgtagtaacaagaaatgcagttcaattattaaaaactattgatgcatta
gatccgtgggaagaccttactgaattgggaagtcatttacttgatttgccaattgaacca
cgacttggaaaaatgttattgtatgctgttgttttgaaatgtttagatccagtcttaaca
attgtatgtagtttagcatacaaagatccatttgtattaccgtttcaaccatcacaaaaa
cgagctgcaaccgctgctcgtaagagatttgcaaccaatacatattctgatcatatggca
gttttacgtgcttttcaaggttggcaaaatgcacgcgcaggtggaaaagaacgcatattt
tgtgaacaaaattttatttctgctgctgttatggaaatggtggttggaatgcgtactcaa
cttcttggtcagcttcgtgcatctggatttgttagagcaaggggtccaggagatattaga
gatttaaattctaattctgaaaattgggcagttgtgaaagcagctttaactgctggttta
tatccaaatttaataagagtagacagagaacacttgcaattaagaacacagaaagaagta
aaagtattttttcatccatcatcaactttaagagattatcctaaatcaccaagaatgaca
tctactcaaacatatgcagctaatgtagaagctttaccttgtgattggttactttatgaa
gaaatgagtcgtacaggacgattttgtcatgttaaaatggttactttggtaaatccatta
acagtagccttgttttgtggaccagcaagattatccgtagatgttatttatgaagctgaa
tctgtaccagaaagtgaatcagattccgaagttgatgaaagtaatgaaggaacgatcttt
aaacttgatgattgggtagtatttaaacttgatccagaaactgccagattttttttacat
ttaaggcaaaaatggaatgctttatttttgagacgtatgaaaacgccgaataaagctatg
tcgcaactcgatgaaaaagtagtgagtaccttagtgagtgtaattacaaatgaggaacag
gcatgtggattacaacagccatctggtattggtcaaagaccgcgccctttaattgttgat
tattatcctgccaatgttaggagaacagatgattttgttgagaggaatttttaa
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