Apis florea (little honeybee): 100872920
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Entry
100872920 CDS
T09140
Name
(RefSeq) DEAD-box ATP-dependent RNA helicase 20
KO
K12823
ATP-dependent RNA helicase DDX5/DBP2 [EC:
5.6.2.7
]
Organism
aflr
Apis florea (little honeybee)
Pathway
aflr03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
aflr00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
100872920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
aflr03041
]
100872920
03009 Ribosome biogenesis [BR:
aflr03009
]
100872920
Enzymes [BR:
aflr01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
100872920
Spliceosome [BR:
aflr03041
]
Complex A
U1 snRNP components
U1 related factors
100872920
Complex B
100872920
Ribosome biogenesis [BR:
aflr03009
]
Eukaryotic type
Pre-60S particles
Helicases
100872920
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
TFIIA
Motif
Other DBs
NCBI-GeneID:
100872920
NCBI-ProteinID:
XP_003691490
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MYNNSYSNHTSYRPRGSRDSTNRNGGGTYWNRQQQTNKEKSIKKQVQRRTPGDSLKKPSW
DLSKLPVITKNLYIPHINILKRSSDEVNKYHIGKEITVKGNNTPSPIQAFEESNFPDYVM
EEIRKQGFAEPTAIQAQGWPIALSGRDLVGIAQTGSGKTLAYILPATVHINHQPRLSRGD
GPIVLILAPTRELAQQIQSVARDFGSSSCIRNTCIFGGSPKGPQARDLERGVEICIATPG
RLIDFLEKGTTNLRRCTYLVLDEADRMLDMGFEPQIRKIIEQIRPDRQVLMWSATWPKEV
QALAEDFLSDYIQINIGSLTLAANHNIRQIVEICQEHEKEMKLSNLLREIGKDRGSKMII
FVETKKKVDDITKAIKREGWPAISIHGDKSQPERDYVLSEFRNGKTMILVATDVAARGLD
VEDVKYVINFDYPNSSEDYIHRIGRTGRCQSAGTAYAYFTPNNARQAKELISVLEEAGQA
INPQLADLANSIKPAYGKGRQRWSHSRSNKDNSSTGSPRNNSSPISNNWQNQHVQSTQHS
NGSSQERTVVRQQNGYQASRQNSFQSNYQPQQHQQQPQQQQHQHQHQQHQQQQQQQQQQH
QRQPNTYTNGCQTTNSYSASYQNANIPRYHGRTGGFQGNRYHNRQSAYNTNQTPGGQSVY
SMPPPFMMPSAGGHTADSSMQSLVNNKFFQTNRPPPNTGACAYQSMGYSQFQAVPPYSYP
YPPTPVQQ
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atgtataacaatagttattccaatcataccagttacagacccaggggaagtagagattct
accaatcgtaatggagggggaacatattggaatagacaacaacagacaaacaaagagaag
tcaattaagaagcaagtccaaagaagaactcctggagattcattgaaaaaacctagctgg
gatctctctaagttaccagtgattacaaaaaatttatatattccacatatcaatatttta
aaacggtccagtgatgaagttaataagtatcacattggtaaagaaatcactgtgaaagga
aacaatactccttctccaattcaagcatttgaagaaagtaacttcccagattatgtaatg
gaagagataagaaagcagggttttgctgaaccaacagcaatccaagcacaaggctggcca
atagcactcagtggtcgtgatttggttggaattgctcaaacaggatctggaaaaacttta
gcttatatattaccagcaactgtacacattaatcatcaaccacgtttgagccgaggagat
ggtcccatcgttttgatactcgccccaacaagagaattagcccaacaaattcaatctgtt
gctagagattttggttcttcctcctgtattcgtaatacttgcatctttggtggttctcca
aaagggcctcaagctcgtgatttagaacgcggtgttgaaatttgtattgcaactcctggt
agattaatcgattttctcgagaaaggaactacgaatttgcgcagatgtacatacctagtc
ttagacgaggcagacagaatgttagatatgggattcgagccgcaaatccgaaaaatcata
gagcaaattagacctgataggcaggtattgatgtggtctgcaacatggccgaaagaagta
caagctttggctgaagatttcctctcagattatattcaaattaacatcggttctttgaca
ttggccgctaatcacaatatccgtcaaatcgtagagatttgtcaagagcatgaaaaagaa
atgaaactctcaaatcttttaagagagatcggcaaagatcgaggaagcaagatgataatt
ttcgttgaaacgaaaaagaaagtggacgatattaccaaagctattaaacgagaaggctgg
cctgctatctctattcacggtgacaaatcacagcctgagagagattatgtattatctgag
tttagaaatggaaaaacaatgattcttgttgctaccgatgttgctgctcgtggcttggac
gtagaagatgtgaaatatgtaattaacttcgattatccgaatagttctgaggattatatt
catagaataggaagaactggacgttgccaaagcgcgggtactgcttatgcttattttacg
cctaataatgctagacaagcaaaagaactaatttctgttttggaagaagctggtcaagca
ataaatccacaattggccgatttagcaaattcgataaaacctgcatacggaaagggtcgc
cagcgttggagtcattctcgttctaataaagataatagttccactggaagtccaagaaat
aacagcagcccaatttcgaataattggcaaaatcagcacgttcagagtactcagcacagt
aatggcagcagtcaagaaaggactgttgtacgccagcaaaatggatatcaggccagtcga
cagaatagtttccaatctaattatcagccgcagcaacatcaacaacaaccgcaacagcag
caacaccaacaccaacaccaacaacatcaacagcagcagcaacagcagcaacaacaacat
cagcggcaaccgaatacttataccaatggctgtcaaactaccaatagctattcagctagt
tatcaaaatgcaaatattcctagatatcatggaagaacaggaggtttccaaggaaatcgt
tatcacaatcgtcagagtgcttacaataccaatcagacacctggaggacaaagcgtatat
tctatgccacctccatttatgatgccatctgcgggcggacacacagctgattcctccatg
caaagcctcgttaacaacaagtttttccaaacgaatcgtccaccaccaaatactggcgct
tgcgcgtatcaatcgatgggatatagtcagttccaagctgtgccaccatatagttatcct
tatccgcccacaccagtgcagcagtga
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