KEGG   Apis florea (little honeybee): 105736301
Entry
105736301         CDS       T09140                                 
Symbol
Gnf1
Name
(RefSeq) germ line transcription factor 1
  KO
K10754  replication factor C subunit 1
Organism
aflr  Apis florea (little honeybee)
Pathway
aflr03030  DNA replication
aflr03410  Base excision repair
aflr03420  Nucleotide excision repair
aflr03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:aflr00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    105736301 (Gnf1)
   03410 Base excision repair
    105736301 (Gnf1)
   03420 Nucleotide excision repair
    105736301 (Gnf1)
   03430 Mismatch repair
    105736301 (Gnf1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:aflr03032]
    105736301 (Gnf1)
   03400 DNA repair and recombination proteins [BR:aflr03400]
    105736301 (Gnf1)
DNA replication proteins [BR:aflr03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    105736301 (Gnf1)
DNA repair and recombination proteins [BR:aflr03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     105736301 (Gnf1)
SSDB
Motif
Pfam: RFC1 BRCT AAA_lid_RFC1 AAA AAA_22 AAA_30 AAA_14 RuvB_N BRCT_2 RNA_helicase AAA_19 PTCB-BRCT DUF1824 AAA_5 AAA_16 AAA_33 AAA_11 AAA_17 F55H2_N AAA_assoc_2 AAA_18
Other DBs
NCBI-GeneID: 105736301
NCBI-ProteinID: XP_086760382
LinkDB
Position
Unknown
AA seq 1017 aa
MPRDIRSYFQTAKINSSIVSTKAVKRRIISSDEDDEKPKPSFKQSKKTKILGKKVIASDS
EEDVKIVSPADIFGKNPIKRQEAPKISKQLQKEEARSHHDDDFERTLCQLDTSDIEQKYL
TETKVNKAIDSHESNDENEEKISIKRKENVKKKKTFDKTNQEKNNEKIFDKTNQEKNNEK
KYKLKSKKHSNSSNEDIEHESSEHNNKIQHKKTSSKKMDTSDIYEEIIAKKKQSATMYQQ
YLQRGGARNPGSKKIPVGAEYCLAGLSFVITGVLDSLEREEAEELIKQYGGRILHQVTKK
TDYIIVGDQAGPSKLSKADSLNIKKISEDDLLDLIRTRPIGCINDMHQSRTKLKDKLKQK
SEELEEESPSKKIKVITNEQTKNLTEIHKEISKKEIETSLKMSPQKQEYDTKNIKIKSPI
KKKYIELKESFIEDKKEIDDVKDIKTNILQDINNKISTQTLVEKYRPKTMKQILGQQGDK
SIAKKLYAWLINWHKNQSGQIKHIKPNPWAKNSDGAFFKAALLSGPPGIGKTTTVQVICN
ELGFDLIEFNASDTRSKKLLEEEVSELLSNTTLKNYFQDNKSKPSSKHVLLMDEVDGMAG
NEDRGGLQELIKLIKSTDIPIVCICNDRNHSKMRTLANYTFDLRFSKPRLEQIRAAMKSI
CFKENINITNEDLDLLIESTNQDIRQIINHLALFVGQIGSQEKSGKKHINKDLKLGSWDV
VKQVFSAEEQKHMNFNEKCDLFFHDYNIAPLFVQENYLLVIPEAPKNKLLEKVAESAESL
ALGDIVENCIRSNNAWSLLPIQACYSSVIPGAAMSGHIGGQINFPAWLGRNSKAGKFNRL
MQEITLHARLTTTASKEAINLDYIKYLRNTIIRPLAVDGIENIAVAIDVMNHYHLLREDL
DSLVEISLWPGQQDPMQVIDSKVKAAFTRAYNKNSVVLPYVVNSTSKKKTAINIQEEGLE
EEEEEVDSDQNDNMDTDKMIKTKKPGTSKNTESKSEKKGKKNNDNIFKRGRGRGKAK
NT seq 3054 nt   +upstreamnt  +downstreamnt
atgccaagagacatacgatcctattttcaaacagctaaaataaattctagcatcgtttca
acaaaggctgttaaaagacgtattatttcgtctgatgaagatgatgaaaaaccaaaacct
tcatttaaacagtctaagaaaacaaaaatattgggaaagaaagttattgcatctgattct
gaagaagatgttaagattgtttctcctgctgatatatttggtaaaaatccaataaagaga
caagaagcacctaagatatctaaacaattacaaaaggaggaagctagaagtcatcatgat
gatgattttgaaagaactttatgtcaattagatacttctgatattgaacaaaaatattta
acagaaactaaagttaataaagccatagattctcatgaaagtaatgatgaaaatgaagaa
aagatttctattaagagaaaagaaaatgttaaaaagaaaaaaacatttgataaaacaaat
caagaaaaaaataatgaaaaaatatttgataaaacaaatcaagaaaaaaataatgaaaaa
aaatataagttaaagtcaaaaaaacattctaatagttcaaatgaagacattgagcatgaa
agttctgaacataataataaaattcaacataaaaagacatcttctaaaaaaatggatact
tctgacatatatgaggaaataattgcaaagaaaaaacaaagtgctacaatgtatcagcaa
tatcttcaaagaggaggagctagaaatccaggctcaaagaaaattcctgttggtgctgaa
tattgcttagcaggattaagttttgtaataactggagttttagattctttggaaagggag
gaagctgaagaacttatcaaacaatatggtggacgaattttacatcaagttacaaagaaa
actgattatattatagtaggtgatcaagctggtccttcaaaattatcaaaggctgatagt
ttaaatataaaaaaaatatcagaagatgatttattagatctgatacgtacacgccctata
ggttgcattaatgatatgcatcaatctcgtacaaaattaaaagataaattaaaacaaaaa
tctgaagaattagaagaagaatcaccatcaaagaaaataaaagttattacgaatgaacag
acaaaaaatttaacagaaatacacaaagaaataagtaagaaagaaatagaaacatcattg
aaaatgtcaccacaaaaacaagaatatgatactaaaaatataaaaataaaatctccaatt
aaaaaaaaatatattgaactcaaagaatcattcatagaagacaagaaagaaattgatgat
gtaaaagatataaaaacaaatattctacaagatataaataataaaatatcaacacagaca
ttggttgaaaaatatagaccaaaaactatgaaacaaattttgggacagcaaggagataaa
agtattgctaagaaattgtatgcttggttaataaattggcataaaaatcaatctggtcaa
ataaaacatataaaacctaatccatgggcaaagaacagtgatggagctttctttaaagca
gctttattatctggtcctcctggaattggaaaaacaacaactgttcaagttatttgcaac
gaattaggttttgatcttatagaatttaatgcatcagatactagaagtaaaaaacttcta
gaagaagaagtatcagaattattatctaatactacattaaaaaattattttcaagataat
aaaagtaaaccgtcatcgaaacatgttttattaatggacgaagtagatggaatggctggt
aatgaagatcgtggtggtctacaagaattaattaaattgatcaaatcaactgacatacct
attgtttgtatttgtaatgatcgaaatcattcgaaaatgagaacacttgctaattataca
tttgatcttcgattttcaaaacctagattggaacaaattagggctgcaatgaaatctata
tgtttcaaagaaaacattaatatcacaaatgaagatcttgatctattaattgaatcaact
aatcaagatattcgacaaattataaatcatttagcattatttgttggacaaattggttct
caagagaaatctggaaagaaacatataaataaggatctgaaattgggttcttgggatgtt
gtaaaacaagtattttctgcagaagaacaaaaacatatgaatttcaatgagaaatgtgat
ctatttttccatgattataatatagcaccactatttgtacaagaaaattatttactggtt
atacctgaagcaccaaaaaataaattattagaaaaagtagctgaaagtgccgagagttta
gcgttgggagatatagttgaaaattgtataagaagtaataatgcctggtctcttttacca
atacaagcttgttattcttctgttatacctggggcagcaatgtctggccatattggtggc
cagattaattttccagcttggcttggacgtaattcaaaagccggtaaatttaatcgttta
atgcaggaaattactttacatgctcgtttgactactactgcaagtaaagaggctataaat
ctggattacattaaatatctcagaaataccattattagacctttagcagttgatggtatt
gaaaatatagctgttgcaatagatgttatgaatcattatcacctactcagagaagattta
gattctttagtagaaatttctttatggcctggtcaacaagatccaatgcaagttatagat
agtaaagtaaaagctgcctttacaagagcatataataagaattctgtagttcttccatat
gtagtgaatagtacatcaaaaaagaaaacagcaataaatatacaagaagaaggtttagaa
gaggaagaagaagaagtagattctgatcaaaatgataatatggatacagataaaatgatc
aagacgaaaaaacctggcacaagtaaaaatacggaatcaaaaagtgaaaagaagggcaaa
aaaaataatgataacatttttaaacgcggaagaggacgaggaaaagcaaaataa

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