Alteriqipengyuania flavescens: QQW98_00930
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Entry
QQW98_00930 CDS
T09518
Name
(GenBank) DNA topoisomerase IB
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
aflv
Alteriqipengyuania flavescens
Brite
KEGG Orthology (KO) [BR:
aflv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
aflv03032
]
QQW98_00930
03400 DNA repair and recombination proteins [BR:
aflv03400
]
QQW98_00930
Enzymes [BR:
aflv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
QQW98_00930
DNA replication proteins [BR:
aflv03032
]
Prokaryotic type
DNA Topoisomerases
QQW98_00930
DNA repair and recombination proteins [BR:
aflv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
QQW98_00930
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
DUF2922
Motif
Other DBs
NCBI-ProteinID:
WJY19959
LinkDB
All DBs
Position
complement(161196..162212)
Genome browser
AA seq
338 aa
AA seq
DB search
MASAPPQIVYVDDSQPGITRKGAGKGWAYYMPDGSLIKDRAEKKRLNAIALPPAYQRAWF
CIDCNGHIQATGHDARGRKQYRYHPEFRAWRESEKFDRCIEFGKALPGLREKVISDMRKP
KLTRDRAVAALVKLLDLGAIRVGNTQYAKANKSYGATTLQQRHAQVTGKTLRLRFIGKGG
KERDIKLSDASLARVVRLMQDLNEQELFAWVGDDGQPQDVNSGHVNEYLRTNMGGPFSAK
NFRTWHASVMAFRLLGEATGKLTIKAVLEQVAEHLGNTPAVTRKSYVHPAVIELIGRQEE
WRKTLRLPRAQPHLNEWERGLLEFLEGEPDAMEIFAAA
NT seq
1017 nt
NT seq
+upstream
nt +downstream
nt
atggcctccgccccgccacagattgtctatgtcgacgattcccagcccgggatcacccgc
aagggcgcggggaagggctgggcctattacatgccggacggttcgctgatcaaagacagg
gcggaaaagaaacgcctcaacgcgatcgccctgccgccggcctaccagcgcgcgtggttc
tgcatcgactgcaacggccacatccaggccaccgggcacgatgcgcgcgggcgcaagcag
tatcgctaccaccccgaattccgcgcctggcgggaaagcgagaagttcgaccgctgcatc
gaattcggcaaggcgctgccgggtttgcgcgaaaaggtgatcagcgacatgcgcaagccc
aagctgacgcgggaccgcgcggtggcggcgctggtaaagctgctggaccttggcgcgatc
cgcgtcggcaacacgcaatatgccaaggcgaacaagagctacggcgccaccacgctgcag
cagcgccacgcgcaggtcaccggaaagacgctgcgcctgcgcttcatcggcaagggcggg
aaggaacgcgacatcaagctgtccgatgcctcgctcgcgcgggtggtgcgcctgatgcag
gatttgaacgagcaggaactgttcgcctgggtgggcgatgacggccagccgcaggacgtc
aattccggccacgtgaacgagtacctgcgcaccaacatgggcgggccgttcagcgccaag
aatttccgcacctggcacgccagcgtcatggctttccgcctgctgggagaagcgaccggg
aagctgacgatcaaggcggtactggaacaggttgcggagcatctgggcaatacgccggcg
gtcacccgcaaaagctatgtccaccccgccgtcatcgagctgatcgggcggcaggaggaa
tggcgcaagacgctgcgcctgccgcgcgcccagccgcacctcaacgaatgggagcgcgga
ttgctcgaattcctggaaggcgagcccgacgctatggaaatcttcgccgcggcctga
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